Job Description Q09746 Confidence 99.67% Date Sun Jul 8 11:56:56 BST 2012 Rank 27 Aligned Residues 238 % Identity 13% Template c3g9gA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:suppressor of yeast profilin deletion; PDBTitle: crystal structure of the n-terminal efc/f-bar domain of syp1 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		M	S	L	E	T	Y	K	F	S	D	E	L	H	.	.	.	.	.	.	D	D	F	K	V	V	D	S	W	I	N	N	G	A	K	W	L	E	D	I	Q	L	Y	Y	K	E	R	S	S	I	E	K	E	Y	A	Q	K	L	A	S	L	S	N	K	Y	G	E	K	K	S	R	K	S	S	A	L	S	V	G	D	T
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	E	Q	R	T	K	Y	A	D	S	I	L	T	T	K	S	P	Y	E	A	T	E	T	I	R	I	R	L	S	Q	V	K	L	L	N	K	D	F	Y	L	L	F	K	E	L	A	N	L	K	R	N	Y	A	Q	Q	L	R	K	I	I	A	E	N	E	D	I	T	K	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T								T	T	T	T	S																																																	S					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	M	S	A	G	S	L	E	C	A	S	L	T	T	W	S	K	I	L	D	E	L	T	R	S	S	K	T	H	Q	K	L	S	D	D	Y	S	L	D	I	A	E	K	L	K	K	L	E	S	H	I	E	A	L	R	K	V	Y	D	D	L	Y	K	K	F	S	S	E	K	E	T	L	L	N	S	V	K	R	A
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	L	N	A	Q	M	I	E	S	N	V	L	T	P	Q	E	M	S	A	F	R	F	N	S	L	G	E	L	R	N	V	W	D	T	V	I	E	E	L	K	S	D	L	K	S	S	T	E	Y	Y	N	T	L	D	Q	Q	V	V	R	E	L	K	E	S	V	E	N	N	T	S	W	R	E	S
Template Known Secondary structure		.	.	.	.	.	.									T	T	S	S													S	T	T																														T							S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	S	Y	H	E	A	C	D	D	L	E	S	A	R	Q	K	N	D	K	Y	R	E	Q	K	T	Q	R	N	L	K	L	S	E	S	D	M	L	D	K	K	N	K	Y	L	L	R	M	L	V	Y	N	A	H	K	Q	K	F	Y	N	E	T	L	P	T	L	L	N	H	M	Q	V	L	N	E	Y	R	V	S	N
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	L	H	S	K	L	S	K	N	A	A	S	I	E	H	Y	S	K	N	N	E	N	S	S	H	L	E	E	A	R	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	Q	Q	S	P	Y	L	F	E	L	F	E	T	I	D	Y	N	R	L	D	T
Template Known Secondary structure																			S	S			S		T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	I	W	C	N	S	F	S	I	E	K	S	L	H	D	T	L	S	Q	R	T	V	E	I	Q	S	E	I	A	K	N	E	P	V	L	D	S	A	M	F	G	R	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	N	C	M	L	R	F	Q	T	S	F	S	D	Y	L	L	N	T	T	K	E	C	E	T	V	M	T	K	F	L	A	F	E	P	Q	S	E	I	D	R	F	A	K	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions