Job Description Q09746 Confidence 99.84% Date Sun Jul 8 11:56:56 BST 2012 Rank 15 Aligned Residues 259 % Identity 21% Template c3acoB_ PDB info PDB header:endocytosis Chain: B: PDB Molecule:protein kinase c and casein kinase substrate in PDBTitle: crystal structure of the efc/f-bar domain of human2 pacsin2/syndapin ii (2.7 a) Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	S	D	E	L	H	D	D	F	K	V	V	D	S	W	I	N	N	G	A	K	W	L	E	D	I	Q	L	Y	Y	K	E	R	S	S	I	E	K	E	Y	A	Q	K	L	A	S	L	S	N	K	Y	G	E	K	K	S	R	K	S	S	A	L	S	V	G	D	T	P	A	M	S	A	G	S	L	E	C	A	S
Query Conservation
Alig confidence							.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	W	E	V	.	.	G	N	Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	S	D	L	X	N	C	L	H	E	R	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	L	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	Q	Y	G	T	V
Template Known Secondary structure			T	T	S	T	.	.	T	T	T																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure							.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		L	T	T	W	S	K	I	L	D	E	L	T	R	S	S	K	T	H	Q	K	L	S	D	D	Y	S	L	D	I	A	E	K	L	K	K	L	E	S	H	I	E	.	.	.	.	.	.	.	.	A	L	R	K	V	Y	D	D	L	Y	K	K	F	S	S	E	K	E	T	L	L	N	S	V	K	R	A	K	V	S	Y
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	A	W	X	A	F	X	S	E	A	E	R	V	S	E	L	H	L	E	V	K	A	S	L	X	N	D	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	X	X	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	L	K	E	V	E	A	A	K	K	A	H
Template Known Secondary structure																													T															B		S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		H	E	A	C	D	D	L	E	S	A	R	Q	K	N	D	K	Y	R	E	.	.	.	.	.	.	.	.	.	Q	K	T	Q	R	N	L	K	L	S	E	S	D	M	L	D	K	K	N	K	Y	L	L	R	M	L	V	Y	N	A	H	K	Q	K	F	Y	N	E	T	L	P	T	L	L	N	H	M	Q	V	L	N	E
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																															.
Template Sequence		H	A	A	C	K	E	E	K	L	A	I	S	R	E	A	N	S	K	A	D	P	S	L	N	P	E	Q	L	K	K	L	Q	D	K	I	E	K	C	K	Q	D	V	L	K	T	K	E	K	Y	E	K	S	L	K	E	L	D	Q	G	T	P	.	Q	Y	X	E	N	X	E	Q	V	F	E	Q	C	Q	Q	F	E	E
Template Known Secondary structure			T	T	T	T	T					T	T					S	S	S		S	S			T	T	T	T	T	T	T	T	G	G	G	T	T	T																	T	T	T	T	T			.
Template Predicted Secondary structure																																																															.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Y	R	V	S	N	L	N	E	I	W	C	N	S	F	S	I	E	.	K	S	L	H	D	T	L	S	Q	R	T	V	E	I	Q	S	E	I	A	K	N	E	P	V	L	D	S	A	M	F	G	R	H	N	S	K	N
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		K	R	L	R	F	F	R	E	V	L	L	E	V	Q	K	H	L	D	L	S	N	V	A	G	Y	K	A	I	Y	H	D	L	E	Q	S	I	R	A	A	D	A	V	E	D	L	R	W	F	R	A	N	H	G	P	G
Template Known Secondary structure																					T	T																																S	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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