Job Description Q09746 Confidence 99.07% Date Sun Jul 8 11:56:56 BST 2012 Rank 216 Aligned Residues 202 % Identity 12% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	C	H	A	R	C	E	L	L	V	P	A	N	C	K	N	G	E	P	E	V	A	D	D	D	A	V	D	T	S	V	T	A	T	D	D	F	D	A	S	A	S	S	S	N	A	Y	E	S	Y	R	N	T	Y	T	D	D	M	D	S	S	S	I	Y	Q	T	S	L	S	N	V	K	T	E	E	T	T	P	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	Y	A	P	P	D	I	T	T	S	Y	S	Q	H	L	D	N	E	I	S	H	S	S	Y	L	G	T	D	Y	P	T	A	M	T	P	T	S	P	R	R	Y	S	P	V	A	K	D	L	L	G	E	E	D	I	P	R	E	P	R	R	I	V	I	H	R	G	S	T	G	L	G	F	N	I	V	G	G	E	D
Template Known Secondary structure			S	S	S		S				S	S	S	S							S						S		S	S	S								S	S	S				S			T	T	S	S		S	S					S									S	S	S										S	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.												.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		P	A	S	K	V	D	G	V	V	L	Y	D	F	T	G	E	H	E	G	V	I	T	A	S	E	G	Q	E	F	T	L	L	E	P	D	D	G	S	G	W	V	.	.	.	.	.	.	.	.	.	.	.	R	V	K	I	D	G	T	D	G	L	I	P	A	S	Y	V	K	L	N	D	E	L	N	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence																					.	.																					.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																					.	.
Template Sequence		G	E	G	I	F	I	S	F	I	L	A	G	G	P	A	D	L	S	G	.	.	E	L	R	K	G	D	Q	I	L	S	V	N	G	V	D	L	R	N	A	S	H	E	Q	A	A	I	A	L	K	N	A	G	Q	T	V	T	I	I	A	Q	Y	K	P	E	E	Y	S	R	F	E	A	K	I	H	D	L	R	E	Q
Template Known Secondary structure		T										T	T	S						S	.	.				S	B							T	T				T	T													T		S	S														T	B	T	T	T	B
Template Predicted Secondary structure																					.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
													578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.						.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.							.	.	630	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	T	S	V	T	L	D	G	D	S	S	Y	V	K	A	L	Y	A	Y	T	A	Q	S	D	M	.	.	.	.	.	E	L	S	I	Q	E	G	D	I	I	Q	V	T	N	R	N	A	G	N	G	W	S	E	G	I	L	.	.	.	.	.	.	N	G	V	T	G	Q	F	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.															.												.	.	.	.	.	.
Template Conservation																																																								.
Template Sequence		L	M	N	S	S	L	G	S	G	T	A	S	L	R	S	N	P	K	R	G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	.	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P
Template Known Secondary structure		S					S			T	T	T	T					S	S	S	S	S					S	S		B						S				S	S	B			B		T	T								.			S	S	S									S	S		T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		636	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		487	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions