Job Description Q09746 Confidence 24.05% Date Sun Jul 8 11:56:56 BST 2012 Rank 315 Aligned Residues 154 % Identity 8% Template c2v71A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel Resolution 2.24 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	V	V	D	S	W	I	N	N	G	A	K	W	L	E	D	I	Q	L	Y	Y	K	E	R	S	S	I	E	K	E	Y	A	Q	K	L	A	S	L	S	N	K	Y	G	E	K	K	S	R	K	S	S	A	L	S	V	G	D	T	P	A	M	S	A	G	S	L	E	C	A	S	L	T	T	W	S	K	I	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	S	L	K	E	E	T	A	Y	W	K	E	L	S	X	K	Y	K	Q	S	F	Q	E	A	R	D	E	L	V	E	F	Q	E	G	S	R	E	L	E	A	E	L	E	A	Q	L	V	Q	A	E	Q	R	N	R	D	L	Q	A	D	N	Q	R	L	K	Y	E	V	E	A	L	K	E	K	L	E	H	Q	Y	A
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	R	S	S	K	T	H	Q	K	L	S	D	D	Y	S	L	D	I	A	E	K	L	K	K	L	E	S	H	I	E	A	L	R	K	V	Y	D	D	L	Y	K	K	F	S	S	E	K	E	T	L	L	N	S	V	K	R	A	K	V	S	Y	H	E	A	C	D	D	L	E	S	A	R	Q
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		Q	S	Y	K	Q	V	S	V	L	E	D	D	L	S	Q	T	R	A	I	K	.	E	Q	L	H	K	Y	V	R	E	L	E	Q	A	N	D	D	L	E	R	A	K	R	A	T	I	X	S	L	E	D	F	E	Q	R	L	N	Q	A	I	E	R	N	A	F	L	E	S	E	L	D	E	K	E	S
Template Known Secondary structure																						.
Template Predicted Secondary structure																						.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions