Job Description Q09746 Confidence 99.88% Date Sun Jul 8 11:56:56 BST 2012 Rank 9 Aligned Residues 196 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	N	G	E	P	E	V	A	D	D	D	A	V	D	T	S	V	T	A	T	D	D	F	D	A	S	A	S	S	S	N	A	Y	E	S	Y	R	N	T	Y	T	D	D	M	D	S	S	S	I	Y	Q	T	S	L	S	N	V	K	T	E	E	T	T	P	A	E	P	A	S	K	V	D	G	V	V	L	Y	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S
Template Known Secondary structure																																		S										S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	H	E	G	V	I	T	A	S	E	G	Q	E	F	T	L	L	E	P	D	D	G	S	G	W	V	R	V	K	I	D	G	T	D	G	L	I	P	A	S	Y	V	K	L	N	D	E	L	N	T	S	V	T	L	D	G	D	S	S	Y	V	K	A	L	Y	A	Y	T	A	Q	S	D	M	E	L	S	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K
Template Known Secondary structure						S	S																																															S	S			T	T								S	S		B				S	T	T				B
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		607	.	.	610	.	.	.	.	.					.	.	.	.	620	.	.	.	.	.											.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	D	I	I	Q	V	T	N	.	.	.	.	R	N	A	G	N	G	W	S	E	G	.	.	.	.	.	.	.	.	.	.	I	L	N	G	V	T	G	Q	F	P	A	N	Y	V	T	D	V
Query Conservation											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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