Job Description Q09746 Confidence 94.71% Date Sun Jul 8 11:56:56 BST 2012 Rank 237 Aligned Residues 109 % Identity 15% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.			.	.	550	.	.	.	.	.	.	.	.	.	560	.	.		.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.										.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																.																						.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																.																						.	.	.	.	.	.	.	.	.
Query Sequence		G	V	I	T	A	S	E	G	Q	E	F	T	L	L	E	P	.	.	D	D	G	S	G	W	V	R	V	K	I	D	G	T	D	.	G	L	I	P	A	S	Y	V	K	L	N	D	E	L	N	T	S	V	T	L	D	.	.	.	.	.	.	.	.	.	G	D	S	S	Y	V	K	A	L	Y	A	Y	T	A	Q	S
Query Conservation																		.	.																.																						.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K
Template Known Secondary structure				G	G	G	G		S	S											S	S									T	T								T	T	T							G	G	G												T	T	T	T	T	S				S	S	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.			.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure																								.	.							.
Query SS confidence																								.	.							.
Query Sequence		D	M	E	L	S	I	Q	E	G	D	I	I	Q	V	T	N	R	N	A	G	N	G	.	.	W	S	E	G	I	L	.	N	G	V	T	G	Q	F	P	A	N	Y	V	T
Query Conservation																								.	.							.
Alig confidence																								.	.							.
Template Conservation
Template Sequence		R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure					G	G	G	S	T	T												T	T									S	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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