Job Description Q09746 Confidence 45.10% Date Sun Jul 8 11:56:56 BST 2012 Rank 277 Aligned Residues 192 % Identity 11% Template c1i49A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	H	D	D	F	K	V	V	D	S	W	I	N	N	G	A	K	W	L	E	D	I	Q	L	Y	Y	K	E	R	S	S	I	E	K	E	Y	A	Q	K	L	A	S	L	S	N	K	Y	G	E	K	K	S	R	K	S	S	A	L	S	V	G	D	T	P	A	M	S	A	G	S	L	E	C	A	S	L	T	T
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	I	E	L	L	R	E	T	K	R	K	Y	E	S	V	L	Q	L	G	R	A	L	T	A	H	L	Y	S	L	L	Q	T	Q	H	A	L	G	D	A	F	A	D	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	S	P	E	L	Q	E	E
Template Known Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																										.	.	.	80	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	K	I	L	D	E	L	T	R	S	S	K	T	H	Q	K	L	S	D	D	Y	S	L	D	I	A	E	K	L	K	K	L	E	S	H	I	E	A	L	R	K	V	Y	D	D	L	Y	K	K	F	S	S	E	K	E	T	L	L	N	S	V	K	R	A	K	V	S	Y	H	E	A	C	D	D	L	E	S	A	R
Query Conservation
Alig confidence																										.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	Y	N	A	E	T	Q	K	L	L	C	K	N	G	E	T	L	L	G	A	V	N	F	.	F	V	S	S	I	N	T	L	V	T	K	T	M	E	D	T	L	M	T	V	K	Q	Y	E	A	A	R	L	E	Y	D	A	Y	R	T	D	L	E	E	L	S	.	.	.	.	.	.	.	.	.	.	L	G	P	R
Template Known Secondary structure																										.											T																														T	.	.	.	.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																										.																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	N	D	K	Y	R	E	Q	K	T	Q	R	N	L	K	L	S	E	S	D	M	L	D	K	K	N	K	Y	L	L	R	M	L	V	Y	N	A	H	K	Q	K	F	Y	N	E	T	L	P	T	L	L	N	H	M	Q	V	L	N	E	Y	R	V	S	N	L	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	G	T	R	G	R	L	E	S	A	Q	A	T	F	Q	A	H	R	D	K	Y	E	K	L	R	G	D	V	A	I	K	L	K	F	L	E	E	N	K	I	K	V	M	H	K	Q	L	L	L	F	H	N	A	V	S	A	Y	F	A	G	N	Q	K	Q	L	E	Q
Template Known Secondary structure		S	T	T																																																																T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions