Job Description C6Y4C9 Confidence 14.97% Date Sun Jul 8 11:45:10 BST 2012 Rank 87 Aligned Residues 96 % Identity 19% Template c2efrB_ PDB info PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	T	H	L	K	E	Q	L	S	R	E	V	Q	R	R	E	E	L	E	G	L	L	E	Q	S	Q	K	E	M	E	D	L	S	V	S	L	F	T	E	A	N	E	M	V	A	K	A	R	Q	D	T	E	V	L	K	R	E	L	D	Y	L	R	A	K	E	K	G	R	I	G	K	L	R	S	I	Q	T	A
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		N	E	V	A	R	L	K	K	L	L	E	R	A	E	E	R	A	E	L	S	E	G	K	S	A	E	L	E	E	E	L	K	T	V	T	N	N	L	.	K	S	L	E	A	Q	A	E	K	Y	S	Q	K	E	D	K	Y	E	E	E	I	K	V	L	S	D	K	L	K	E	A	E	T	R	A	E	F	A	E	R	S
Template Known Secondary structure																																								.
Template Predicted Secondary structure																																								.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	T	S	I	E	A	R	K	L	L	S	Y	S	N	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	K	L	E	K	S	I	D	D	L	E	D	E	L	Y	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions