Job Description C6Y4D2 Confidence 4.56% Date Sun Jul 8 11:45:10 BST 2012 Rank 34 Aligned Residues 60 % Identity 8% Template d1nh2a1 SCOP info TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain Resolution 1.90

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		60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		N	N	Y	G	L	.	K	F	N	V	N	H	R	L	P	N	D	Q	T	P	T	F	S	I	I	S	N	N	K	V	I	Y	S	Y	D	M	R	S	K	Q	L	E	T	I	S	S	D	I	Q	K	A	L	K	E	L	H	H	E	S	S	P	E	N
Query Conservation							.
Alig confidence							.									.	.
Template Conservation																.	.
Template Sequence		Y	N	P	K	R	F	A	A	V	I	M	R	I	R	.	.	E	P	K	T	T	A	L	I	F	A	S	G	K	M	V	V	T	G	A	K	S	E	D	D	S	K	L	A	S	R	K	Y	A	R	I	I	Q	K	I	G	F	A	A	K	F	T	D
Template Known Secondary structure				T	T	T		S	S							.	.	T	T								T	T	S								S	S																			T						B
Template Predicted Secondary structure																.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions