 |
| Job Description | C6Y4D2 | | Confidence | 2.03% | Date | Sun Jul 8 11:45:10 BST 2012 |
| Rank | 80 | Aligned Residues | 52 |
| % Identity | 10% | Template | d1aisa2 |
| SCOP info | TBP-like
| TATA-box binding protein-like
| TATA-box binding protein (TBP), C-terminal domain
|
| Resolution | 2.10 |
|
|   |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | N | Y | G | L | K | F | N | V | N | H | R | L | P | N | D | Q | T | P | T | F | S | I | I | S | N | N | K | V | I | Y | S | Y | D | M | R | S | K | Q | L | E | T | I | S | S | D | I | Q | K | A | L | K | E |
| Query Conservation |   |
  |
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |
|
|
|   |   |
| Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
| . |   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
| Template Sequence |   |
Y | E | P | E | . |
Q | F | P | G | V | I | Y | R | V | K | E | P | K | S | V | I | L | L | F | S | S | G | K | I | V | C | S | G | A | K | S | E | A | D | A | W | E | A | V | R | K | L | L | R | E | L | D | K |
| Template Known Secondary structure |   |
|
| T | T | . | T |
| S | S |  |  |  |  |  | T | T | T | T |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
 |
|
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
129 | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|