Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4D2
Confidence2.03%DateSun Jul 8 11:45:10 BST 2012
Rank80Aligned Residues52
% Identity10%Templated1aisa2
SCOP infoTBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110..
Predicted Secondary structure 




















Query SS confidence 




















































Query Sequence  NNYGLKFNVNHRLPNDQTPTFSIISNNKVIYSYDMRSKQLETISSDIQKALKE
Query Conservation   

     
 
       
 
 

     
 



 

 

 
   
 


  
Alig confidence 



.















































Template Conservation 
 

. 




 
   
  
 


 



 





 
    
   
   
 
Template Sequence  YEPE. QFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDK
Template Known Secondary structure 

TT.T
SSTTTT
TTSSSTT
Template Predicted Secondary structure 


.











Template SS confidence 




















































   129130.. .......140.........150.........160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions