Job Description C6Y4D2 Confidence 2.23% Date Sun Jul 8 11:45:10 BST 2012 Rank 69 Aligned Residues 52 % Identity 13% Template c3agkA_ PDB info PDB header:translation Chain: A: PDB Molecule:peptide chain release factor subunit 1; PDBTitle: crystal structure of archaeal translation termination factor, arf1 Resolution 2.10 Å

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Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	T	P	T	F	S	I	I	S	N	N	K	V	I	Y	S	Y	D	M	R	S	K	Q	L	E	T	I	S	S	D	I	Q	K	A	.	.	.	.	.	.	.	.	.	.	L	K	E	L	H	H	E	S	S	P	E	N	I	K	E	A	H	K	Q	D	Y	S	P	P	S	N
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		P	A	T	V	L	L	S	L	Y	I	.	.	.	.	.	.	.	.	.	P	P	G	R	P	L	S	D	V	M	T	L	L	R	Q	E	Y	S	I	T	D	N	I	K	L	K	R	T	R	Q	A	V	K	R	A	L	S	A	A	M	D	R	L	Q	M	L	T	S	T	P	P	N
Template Known Secondary structure		S	S	S								.	.	.	.	.	.	.	.	.		T	T	S																G	G	G			S																			T	T		S	S			T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions