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Job DescriptionO94669
Confidence94.86%DateSun Jul 8 11:54:00 BST 2012
Rank17Aligned Residues91
% Identity11%Templatec3cueO_
PDB info PDB header:protein transportChain: O: PDB Molecule:transport protein particle 18 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab ypt1p
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30 .........40.........50.........60.........70....
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Query Sequence  TIEAIYLVDTNGALLLQLESRGRTSPIT. . . . . . . . LEHIKNELFRYKLRNEEPPFILHNKNFLIFQELEEDVRLCIPTT
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Template Sequence  GIYSFWIFDRHCNCIFDREWKQNEEDAKLLYGMIFSLRSITQKLSKGSVKNDIRS. ISTGKYRVHTYCTASGLWFVLLSD
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   2.......10.........20.........30.........40.........50...... ...60.........70.........80
 
   75....80.........90. .....
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Query Sequence  CDTEPLYIHDIMRRIVD. VVKTF
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Template Sequence  FKQQS. . YTQVLQYIYSHIYVKY
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   94.... .100.........110....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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