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| Job Description | O94669 | | Confidence | 4.72% | Date | Sun Jul 8 11:54:00 BST 2012 |
| Rank | 97 | Aligned Residues | 95 |
| % Identity | 15% | Template | c3pr6A_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:trapp-associated protein tca17; |
PDBTitle: crystal structure analysis of yeast trapp associate protein tca17
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| Resolution | 1.80 Å |
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| Query Sequence |   |
I | Y | L | V | D | T | N | G | A | L | L | L | Q | L | E | S | R | G | R | T | S | . |
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| Template Conservation |   |
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| Template Sequence |   |
V | S | L | I | D | E | S | D | K | P | I | L | I | Y | V | P | N | D | V | L | K | Y | N | V | L | S | N | I | S | L | D | Y | F | E | S | A | L | V | E | W | H | S | L | D | S | K | P | L | L | K | S | I | F | Q | L | E | G | V | S | V | F | A | X | L | I | K | Q | T | G | L | K | I | V | I | G | F | E | Q | K | S |
| Template Known Secondary structure |   |
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8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
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75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
C | D | T | E | P | L | Y | I | H | D | I | M | R | R | I | V | D | V | V | K | T | F | F | G | G | F | N |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
L | S | G | A | D | D | E | F | E | A | I | N | Q | I | F | E | T | V | R | K | I | Y | I | R | V | K | C |
| Template Known Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
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95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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