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Job DescriptionO94669
Confidence90.29%DateSun Jul 8 11:54:00 BST 2012
Rank24Aligned Residues90
% Identity13%Templatec2vx8D_
PDB info PDB header:endocytosis,exocytosisChain: D: PDB Molecule:nucleoporin-like protein rip, vesicle-associated PDBTitle: vamp7 longin domain hrb peptide complex
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSTIEAIYLVDTNGALLLQLESRGRTSPITLEHIKNELFRYKLRNEEPPFILHNKNFLIFQELEEDVRLCIPTTCDTEPL
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Template Sequence  MAILFAVVA. . RGTTILAKHAWCGGNFLEVTEQILAKIPSENNKL. . . . . TYSHGNYLFHYICQDRIVYLCITDDDFSR.
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   44.....50.. .......60.........70.........80...... ...90.........100.........110.....
 
   81........90.........
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Query Sequence  YIHDIMRRIVDVVKTFFGG
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Template Sequence  . AFSFLNEVKKRFQTTYGS
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   118.120.........130.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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