Return to main results Retrieve Phyre Job Id

Job DescriptionO94669
Confidence90.82%DateSun Jul 8 11:54:00 BST 2012
Rank23Aligned Residues85
% Identity11%Templatec2nupC_
PDB info PDB header:protein transportChain: C: PDB Molecule:vesicle-trafficking protein sec22b; PDBTitle: crystal structure of the human sec23a/24a heterodimer,2 complexed with the snare protein sec22b
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  ALLLQLESRGRTSPITLEHIKNELFRYKLRNEEPPFILHNKNFLIFQELEEDVRLCIPTTCDTEPLYIHDIMRRIVDVVK
Query Conservation    
  
 
           
   
            
               
  
 
     
 
     
  
  

 
Alig confidence 















































































Template Conservation 


 
   
           

 

 

      
 
     
 

     

  
 
 
       

 

 

   
 
Template Sequence  DGLPLAASMQEDDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFD
Template Known Secondary structure  TT






TTS
STTTT

BTTS
Template Predicted Secondary structure 






















Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   95....
Predicted Secondary structure 

Query SS confidence 




Query Sequence  TFFGG
Query Conservation   
   
Alig confidence 




Template Conservation    
  
Template Sequence  EQHGK
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 




   97..100.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions