Return to main results Retrieve Phyre Job Id

Job DescriptionO94669
Confidence100.00%DateSun Jul 8 11:54:00 BST 2012
Rank6Aligned Residues221
% Identity23%Templatec3ml6D_
PDB info PDB header:protein transportChain: D: PDB Molecule:chimeric complex between protein dishevlled2 homolog dvl-2 PDBTitle: a complex between dishevlled2 and clathrin adaptor ap-2
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180.........190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ATNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTKLGNVRFHQSVNLKRWKQHPDQIEFIPP
Query Conservation    


 


 
 
       
 
    
 
 
     


 
   
 
     
 
  

 

         
 


 

Alig confidence 
















































......










......







Template Conservation 










 
  
    
 

 
 
 
 
  

 


 
   
 

......
 


 

 
 ......
 





Template Sequence  SRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMN. . . . . . DCTFHQCVRLS. . . . . . RSISFIPP
Template Known Secondary structure 



TTS

SS


......


B
TT

......



Template Predicted Secondary structure 












......








......


Template SS confidence 















































































   11691170.........1180.........1190.........1200.........1210....... ..1220........ .1230......
 
   254.....260.........270......... 280.........290.........300.........310.........320.........
Predicted Secondary structure 











....























Query SS confidence 

























. . . .

















































Query Sequence  DGKFTLASFQTDFATQKSLPVVVEAK. . . . NKLDGRFEVRIRNTGKKSVENLKILITIPQALKSVTVTEGNYIFRASKYT
Query Conservation 

 
 

 
 
      
 
      ....        
              
 



                     
Alig confidence 

























....












































....
Template Conservation 

 
 

 


     


 
   
        

 
 
 
       
 

 
 

 
          
 
   ....
Template Sequence  DGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAK. . . . Y
Template Known Secondary structure  S
SS


STTT
S
TT



TTSSS....
Template Predicted Secondary structure 



























....
Template SS confidence 















































































   12691270.........1280.........1290.........1300.........1310.........1320.........1330.........1340... .
 
   330.........340.........350.........360.........370.........380.........390.........400.. ...
Predicted Secondary structure 




































....


Query SS confidence 








































































. . . .


Query Sequence  HMEEGILEWSVKKLAWTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTLHNFKVESLKMLNH. . . . PDK
Query Conservation        
 
 
 
                                   
 
 
 
     


 
  
 
   ....   
Alig confidence 
































............










.















....


Template Conservation        


 
 

 
     
   
 
 
   ............  



 



. 
 


 
  


          
Template Sequence  KASENAIVWKIKRMAGMKESQISAEIELLPTWA. . . . . . . . . . . . RPPISMNFEVP. FAPSGLKVRYLKVFEPKLNYSDH
Template Known Secondary structure  GGGT
SS




............



S.S
TT



SSSS

GG
Template Predicted Secondary structure 















............


.











Template SS confidence 















































































   1345....1350.........1360.........1370....... ..1380........ .1390.........1400.........1410.
 
   406...410.........420...
Predicted Secondary structure 







Query SS confidence 

















Query Sequence  KSYKGVKHTIIAQNVSFR
Query Conservation 
  
 


 
 

 
  
Alig confidence 

















Template Conservation 

 






 

 
 

Template Sequence  DVIKWVRYIGRSGIYETR
Template Known Secondary structure  G


B

Template Predicted Secondary structure 








Template SS confidence 

















   1417..1420.........1430....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions