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Job DescriptionO94669
Confidence96.03%DateSun Jul 8 11:54:00 BST 2012
Rank13Aligned Residues94
% Identity13%Templatec3cueM_
PDB info PDB header:protein transportChain: M: PDB Molecule:transport protein particle 23 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab ypt1p
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20..... ....30.........40.........50
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Query Sequence  TIEAIYLVDTNGALLLQLESRGR. . . TSPITLEHIKNELFRYKLRNEEPPF. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AIETILVINKSGGLIYQRNFTNDEQKLNSNEYLILASTLHGVFAIASQLTPKALIPYIPYVGMDDFFKEPFTNWNKSGLR
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   51..... ...60.........70........ .80.........90......
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Query Sequence  ILHNKN. FLIFQELEEDVRLCIPTTCDTE. . PLYIHDIMRRIVDVVKTF
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Template Sequence  QLCTDQFTMFIYQTLTGLKFVAISSSVMNLAIQIADNFLRKVYCLYSDY
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   121........130.........140.........150.........160.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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