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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
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| Query SS confidence |   |
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| Query Sequence |   |
I | E | A | I | Y | L | V | D | T | N | G | A | L | L | L | Q | L | E | S | R | G | R | T | S | P | I | T | L | E | H | I | K | N | E | L | F | R | Y | K | L | R | . |
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N | E | E | P | P | F | I | L | H | N | K | N | F | L | I | F | Q | E | L | E | E | D | V | R | L | C | I | P | T | T | C | D | T |
| Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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| Alig confidence |   |
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| Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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| Template Sequence |   |
L | H | A | I | V | V | S | D | R | D | G | V | P | V | I | K | V | A | N | D | N | A | P | E | H | A | L | R | P | G | F | L | S | T | F | A | L | A | T | D | Q | G | S | K | L | G | L | S | K | N | K | S | I | I | C | Y | Y | N | T | Y | Q | V | V | Q | F | N | R | L | P | L | V | V | S | F | I | A | S | S | S | A |
| Template Known Secondary structure |   |
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| T | T | S |
|  |  |  |  |  |  |
| T | T | S |
| G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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| S | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | S |
| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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|   |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
|   |
|   |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
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| Query Sequence |   |
E | P | L | Y | I | H | D | I | M | R | R | I | V | D | V | V | K | T |
| Query Conservation |   |
|   |
|   |   |   |   |   |
|   |   |
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| Alig confidence |   |
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| Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
| Template Sequence |   |
N | T | G | L | I | V | S | L | E | K | E | L | A | P | L | F | E | E |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
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|   |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
|   |