|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | E | A | I | Y | L | V | D | T | N | G | A | L | L | L | Q | L | E | S | R | G | R | T | S | P | I | T | L | E | H | I | K | N | E | L | F | R | Y | K | L | R | N | E | E | P | P | F | I | L | H | N | K | N | F | L | I | F | Q | E | L | E | E | D | V | R | L | C | I | P | T | T | C | D | T | E | P | L | Y | I | H |
| Query Conservation |   |
|   |
|
|   |
|   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
| Template Sequence |   |
I | G | G | L | F | I | Y | N | H | K | G | E | V | L | I | S | R | V | Y | R | D | D | I | G | R | N | A | V | D | A | F | R | V | N | V | I | H | A | R | Q | Q | V | R | S | P | . |
. |
V | T | N | I | A | R | T | S | F | F | H | V | K | R | S | N | I | W | L | A | A | V | T | K | Q | N | V | N | A | A | M | V | F |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
| S | S | S |
| S |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |
|
|
|
| S | . | . |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | I | M | R | R | I | V | D | V | V | K | T | F | F | G | G | F | N | A | S | K | V | E | K | N | V | C | V | I | V | Q | L | L | A | E | M | I | D | Y | G | Y | A | T | C | M | E | P | N | A | L | Q | D | I | V | P | L | P | S | F | M | N | K |
| Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
| Template Sequence |   |
E | F | L | Y | K | M | C | D | V | M | A | A | Y | F | G | K | I | S | E | E | N | I | K | N | N | F | V | L | I | Y | E | L | L | D | E | I | L | D | F | G | Y | P | Q | N | S | E | T | G | A | L | K | T | F | I | T | Q | Q | G | I | K | S | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
| B | T | T | B |
|
|
|
|
| T | T | T |
| G | G | G |
|
|
|
|
|
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
|   |