 |
| Job Description | O94669 | | Confidence | 93.35% | Date | Sun Jul 8 11:54:00 BST 2012 |
| Rank | 21 | Aligned Residues | 97 |
| % Identity | 15% | Template | d1ioua_ |
| SCOP info | Profilin-like
| SNARE-like
| Synatpobrevin N-terminal domain
|
| Resolution | UNK |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | I | E | A | I | Y | L | V | D | T | N | G | A | . |
. |
L | L | L | Q | L | E | S | R | G | R | . |
. |
. |
. |
. |
. |
. |
T | S | P | I | T | L | E | H | I | K | N | E | L | F | R | Y | K | L | R | N | E | E | P | P | F | I | L | H | N | K | N | F | L | I | F | Q | E | L | E | E | D | V | R | L | C | I | P | T |
| Query Conservation |   |
  |
|   |
|
|   |
|   |
|   |   |
|   | . | . |   |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |
|   |
| Template Sequence |   |
R | I | Y | Y | I | G | V | F | R | S | G | G | E | K | A | L | E | L | S | E | V | K | D | L | S | Q | F | G | F | F | E | R | S | S | V | G | Q | F | M | T | F | F | A | E | T | V | A | S | R | T | G | A | G | E | R | Q | S | I | E | E | G | N | Y | I | G | H | V | Y | A | R | S | E | G | I | C | G | V | L | I | T |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  | B |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
|   |
|   |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | C | D | T | E | P | L | Y | I | H | D | I | M | R | R | I | V | D | V | V | K | T | F | F | G | G |
| Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
| Template Sequence |   |
D | K | Q | Y | P | V | R | P | A | Y | T | L | L | N | K | I | L | D | E | Y | L | V | A | H | P | K |
| Template Known Secondary structure |   |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|