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Job DescriptionO94669
Confidence100.00%DateSun Jul 8 11:54:00 BST 2012
Rank5Aligned Residues242
% Identity24%Templated2pr9a1
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
Resolution2.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VPWRTAKAKYATNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTK. . . LGNVRFHQSVNLKR
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Template Sequence  IGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKKQSIAIDDCTFHQCVRL. .
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   241........250.........260.........270......... 280.........290.........300.........310......
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Query Sequence  WKQHPDQIEFIPPDGKFTLASFQTDFATQKSLPVVVEAK. . . . NKLDGRFEVRIRNTGKKSVENLKILITIPQALKSVTV
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Template Sequence  . . . . SRSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQV
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   255....260.........270.........280.........290.........300.........310.........320.........330
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  TEGNYIFRASKYTHMEEGILEWSVKKLAWTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTLHNFKVES
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Template Sequence  ICMKGKAK. . . . YKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWA. . . . . . . RPPISMNFEVP. FAPSGLKVRY
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   336...340... ......350.........360.........370.........380.. .......390... ......400...
 
   397..400 .........410.........420...
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Query Sequence  LKML. . . . NHPDKKSYKGVKHTIIAQNVSFR
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Template Sequence  LKVFEPKLNYSDHDVIKWVRYIGRSGIYETR
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   404.....410.........420.........430....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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