Job Description O94669 Confidence 55.64% Date Sun Jul 8 11:54:00 BST 2012
Rank 29 Aligned Residues 88
% Identity 7% Template c2go51_
PDB info
PDB header: translation/rnaChain: 1: PDB Molecule: signal recognition particle receptor alpha
PDBTitle: structure of signal recognition particle receptor (sr) in2 complex with signal recognition particle (srp) and3 ribosome nascent chain complex
Resolution 7.40 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . .
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Predicted Secondary structure  
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Query Sequence  
S T I E A I Y L V D T N G A L L L Q L E S R G R T S P I T L E H I K N E L F R Y K L R N E E P P F I L H N K N F L I F Q E L E E .
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D V R L C I P T T C D T E P
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
S M V D F F T I F S K G G L V L W C F Q G V S D S C T G P V N A L I R S V L L Q E T H .
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E A L T L K Y K L D N Q F E L V F V V G F Q K I L T L
Template Known Secondary structure  
S T T S B T T T B S T G G G . . . . . . . . . . T T T T S G G G
Template Predicted Secondary structure  
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Template SS confidence  
   
0 . . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . .
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80 . . . . . . . . . 90 . . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
L Y I H D I M R R I V D V V K T F F G G
Query Conservation  
                           
Alig confidence  
Template Conservation  
                         
Template Sequence  
T Y V D K L I D D V H R L F R D K Y R T
Template Known Secondary structure  
T
Template Predicted Secondary structure  
Template SS confidence  
   
77 . . 80 . . . . . . . . . 90 . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]