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Job DescriptionO94669
Confidence95.28%DateSun Jul 8 11:54:00 BST 2012
Rank15Aligned Residues91
% Identity15%Templatec2dmwA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSTIEAIYLVDTNGALLLQLESRGRTSPITLEHIKNELFRYKLRNEEPPFILHNKNFLIFQELEEDVRLCIPTTCDTEPL
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Template Sequence  MAILFAVVA. . RGTTILAKHAWCGGNFLEVTEQILAKIPSENNKL. . . . . TYSHGNYLFHYICQDRIVYLCITDDDFERS
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   8.10...... ...20.........30.........40.........50 .........60.........70.........80
 
   81........90........
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Query Sequence  YIHDIMRRIVDVVKTFFG
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Template Sequence  RAFNFLNEIKKRFQTTYG
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   81........90........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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