Job Description C6Y4A2 Confidence 1.63% Date Sun Jul 8 11:45:04 BST 2012 Rank 72 Aligned Residues 47 % Identity 23% Template c1xb4C_ PDB info PDB header:unknown function Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8 PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii Resolution 3.10 Å

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Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	I	E	D	W	C	R	E	T	G	E	Q	V	D	H	Q	L	V	C	T	V	G	E	K	S	K	E	K	I	C	L	L	E	R	T	C	S	L	E	G	L	S	T	V	L	M	S	E	N	F	K	D	T	L	E	E
Query Conservation
Alig confidence													.	.	.														.	.	.	.	.	.																				.
Template Conservation													.	.	.														.	.	.	.	.	.																				.
Template Sequence		S	L	I	L	Q	W	F	E	D	S	G	.	.	.	K	L	N	Q	V	I	T	L	Y	E	L	S	E	.	.	.	.	.	.	T	V	N	W	E	F	H	R	M	P	E	S	L	L	Y	Y	C	L	K	.	P	L	C	D
Template Known Secondary structure										T	T	S	.	.	.		T	T	S				T	T	T	T			.	.	.	.	.	.				S	T	T	T	T												.				G
Template Predicted Secondary structure													.	.	.														.	.	.	.	.	.																				.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions