Email l.a.kelley@imperial.ac.uk Description A6X982 Date Sun Jul 8 11:45:03 BST 2012 Unique Job ID 8a2b2600b63557d9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2vfyA_ 100.0 19 PDB header:hydrolase Chain: A: PDB Molecule:akap18 delta; PDBTitle: akap18 delta central domain 2 c1vdxA_ 100.0 18 PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase 3 d1iuha_ 100.0 17 Fold:LigT-like Superfamily:LigT-like Family:2'-5' RNA ligase LigT 4 c2d4gA_ 99.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bsu11850; PDBTitle: structure of yjcg protein, a putative 2'-5' rna ligase from2 bacillus subtilis 5 d1jh6a_ 99.8 18 Fold:LigT-like Superfamily:LigT-like Family:tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase 6 d2fsqa1 97.6 14 Fold:LigT-like Superfamily:LigT-like Family:Atu0111-like 7 d2vv5a2 66.5 16 Fold:Ferredoxin-like Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain 8 c3i24B_ 46.1 12 PDB header:hydrolase Chain: B: PDB Molecule:hit family hydrolase; PDBTitle: crystal structure of a hit family hydrolase protein from2 vibrio fischeri. northeast structural genomics consortium3 target id vfr176 9 d2ilxa1 44.4 15 Fold:LigT-like Superfamily:LigT-like Family:2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain 10 c2dh9A_ 39.2 8 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m 11 c3oheA_ 34.0 14 PDB header:hydrolase Chain: A: PDB Molecule:histidine triad (hit) protein; PDBTitle: crystal structure of a histidine triad protein (maqu_1709) from2 marinobacter aquaeolei vt8 at 1.20 a resolution 12 c1lqlE_ 27.0 11 PDB header:unknown function Chain: E: PDB Molecule:osmotical inducible protein c like family; PDBTitle: crystal structure of osmc like protein from mycoplasma2 pneumoniae 13 d1lqla_ 27.0 11 Fold:OsmC-like Superfamily:OsmC-like Family:Ohr/OsmC resistance proteins 14 c2jx2A_ 23.7 10 PDB header:transcription Chain: A: PDB Molecule:negative elongation factor e; PDBTitle: solution conformation of rna-bound nelf-e rrm 15 c3eerA_ 22.8 9 PDB header:oxidoreductase Chain: A: PDB Molecule:organic hydroperoxide resistance protein, putative; PDBTitle: high resolution structure of putative organic hydroperoxide resistance2 protein from vibrio cholerae o1 biovar eltor str. n16961 16 d1fp2a2 21.1 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 17 c2zyzA_ 18.8 13 PDB header:splicing Chain: A: PDB Molecule:putative uncharacterized protein pae0789; PDBTitle: pyrobaculum aerophilum splicing endonuclease 18 c3m05A_ 18.5 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pepe_1480; PDBTitle: the crystal structure of a functionally unknown protein2 pepe_1480 from pediococcus pentosaceus atcc 25745 19 d1huua_ 18.1 18 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 20 d1wvfa1 17.6 14 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Vanillyl-alcohol oxidase-like 21 c3ke3A_ not modelled 15.4 9 PDB header:transferase Chain: A: PDB Molecule:putative serine-pyruvate aminotransferase; PDBTitle: crystal structure of putative serine-pyruvate aminotransferase2 (yp_263484.1) from psychrobacter arcticum 273-4 at 2.20 a resolution 22 c3cjeA_ not modelled 14.6 13 PDB header:oxidoreductase Chain: A: PDB Molecule:osmc-like protein; PDBTitle: crystal structure of an osmc-like hydroperoxide resistance protein2 (jann_2040) from jannaschia sp. ccs1 at 1.70 a resolution 23 d2bz2a1 not modelled 12.8 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 24 d1p71a_ not modelled 12.5 16 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 25 d1owfb_ not modelled 12.4 13 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 26 c1zoqA_ not modelled 11.5 7 PDB header:transcription/transferase Chain: A: PDB Molecule:interferon regulatory factor 3; PDBTitle: irf3-cbp complex 27 d1owfa_ not modelled 11.3 21 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 28 d1b8za_ not modelled 10.2 13 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 29 c2x5fB_ not modelled 9.5 16 PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase 30 c2np2B_ not modelled 8.4 9 PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb; PDBTitle: hbb-dna complex 31 d2cpxa1 not modelled 8.3 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 32 d1mula_ not modelled 8.2 19 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 33 d2opla1 not modelled 8.2 7 Fold:OsmC-like Superfamily:OsmC-like Family:Ohr/OsmC resistance proteins 34 d1nekc_ not modelled 8.0 29 Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) 35 c1sqwA_ not modelled 8.0 13 PDB header:unknown function Chain: A: PDB Molecule:saccharomyces cerevisiae nip7p homolog; PDBTitle: crystal structure of kd93, a novel protein expressed in the2 human pro 36 c3i4sB_ not modelled 7.8 12 PDB header:hydrolase Chain: B: PDB Molecule:histidine triad protein; PDBTitle: crystal structure of histidine triad protein blr8122 from2 bradyrhizobium japonicum 37 d2o97b1 not modelled 7.2 15 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 38 c3c4iA_ not modelled 7.2 18 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein hu homolog; PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv] 39 c3pplB_ not modelled 7.2 11 PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution 40 c1yq3C_ not modelled 7.0 36 PDB header:oxidoreductase Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit; PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone 41 c2po3B_ not modelled 6.9 19 PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product 42 d1qwta_ not modelled 6.8 7 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:Interferon regulatory factor 3 (IRF3), transactivation domain 43 d1sqwa2 not modelled 6.5 12 Fold:Cystatin-like Superfamily:Pre-PUA domain Family:Nip7p homolog, N-terminal domain 44 d1z84a2 not modelled 6.4 11 Fold:HIT-like Superfamily:HIT-like Family:Hexose-1-phosphate uridylyltransferase 45 d2fm8a1 not modelled 6.3 10 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 46 c3ksvA_ not modelled 6.3 7 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: hypothetical protein from leishmania major 47 c2ogeC_ not modelled 6.1 14 PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form 48 c2du4B_ not modelled 5.7 6 PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys 49 d1ry9a_ not modelled 5.4 7 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone