Job Description A6X982 Confidence 8.28% Date Sun Jul 8 11:45:03 BST 2012 Rank 31 Aligned Residues 73 % Identity 18% Template d2cpxa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10		.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure								.				.	.
Query SS confidence								.				.	.
Query Sequence		N	L	L	F	L	A	.	L	P	I	.	.	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K	K
Query Conservation								.				.	.
Alig confidence								.				.	.																													.	.	.																									.	.	.	.	.	.
Template Conservation																																										.	.	.																									.	.	.	.	.	.
Template Sequence		K	V	L	Y	L	K	N	L	S	P	R	V	T	E	R	D	L	V	S	L	F	A	R	F	Q	E	K	K	G	P	P	I	Q	F	R	M	M	T	G	R	.	.	.	M	R	G	Q	A	F	I	T	F	P	N	K	E	I	A	W	Q	A	L	H	L	V	N	G	.	.	.	.	.	.	Y	K	L	Y	G	K	I
Template Known Secondary structure		S									T	T										T						S	S	S	S									S	S	.	.	.	S		S							S	S											S	T	T	.	.	.	.	.	.		B		S	S		B
Template Predicted Secondary structure																																										.	.	.																									.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.
		82	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	I	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	I	E	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions