Job Description A6X982 Confidence 99.80% Date Sun Jul 8 11:45:03 BST 2012 Rank 5 Aligned Residues 170 % Identity 18% Template d1jh6a_ SCOP info LigT-like LigT-like tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase Resolution 1.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Y	P	N	L	L	F	L	A	L	P	I	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K
Query Conservation
Alig confidence							.						.																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation							.						.																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		V	K	K	D	V	.	Y	S	V	W	A	.	L	P	D	E	E	S	E	P	R	F	K	K	L	M	E	A	L	R	S	E	F	T	G	P	R	F	V	P	.	.	.	.	H	V	T	V	A	V	S	A	Y	L	T	A	D	E	A	K	K	M	F	E	S	A	C	D	.	.	.	.	.	.	.	.	.	G	L	K
Template Known Secondary structure							.						.				T	T	T																T							.	.	.	.																									.	.	.	.	.	.	.	.	.	T		B
Template Predicted Secondary structure							.						.																													.	.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.		.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		K	I	T	I	D	L	K	G	T	S	F	F	G	K	S	P	Q	E	A	K	V	L	Y	A	T	P	.	.	.	.	.	V	D	K	H	N	E	W	L	K	V	I	F	T	E	H	N	L	F	T	K	D	A	R	P	L	T	L	H	C	T	L	L	N	S	R	Y	I	K	Y	Q	G	R	R	I	R	F	F	N	S
Query Conservation																												.	.	.	.	.
Alig confidence																.	.	.										.	.	.	.	.													.	.	.	.	.																											.	.	.	.	.
Template Conservation																.	.	.																											.	.	.	.	.																											.	.	.	.	.
Template Sequence		A	Y	T	A	T	V	D	R	V	S	T	G	T	F	.	.	.	F	F	Q	C	V	F	L	L	L	Q	T	T	P	E	V	M	E	A	G	E	H	C	K	N	H	F	.	.	.	.	.	N	C	S	T	T	T	P	Y	M	P	H	L	S	L	L	Y	A	E	L	T	E	E	E	K	K	N	.	.	.	.	.	A
Template Known Secondary structure																.	.	.	T	T																								T	.	.	.	.	.	T					S																					.	.	.	.	.
Template Predicted Secondary structure																.	.	.																											.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		E	P	F	M	E	K	Y	G	Q	F	L	W	A	H	N	I	E	L	D	K	L	S	I	M	K	T	G	A	V	G	E	P	G	N	M	Y	.	Y	E	E	L	A	S	I	P	L
Query Conservation																																						.
Alig confidence																											.	.										.
Template Conservation																											.	.
Template Sequence		Q	E	K	A	Y	T	L	D	S	S	L	D	G	L	S	F	R	L	N	R	L	A	L	C	K	.	.	T	D	T	E	D	K	T	L	E	T	W	E	T	V	A	V	C	N	L
Template Known Secondary structure										T	T		T	T													.	.			T	T		T	T		T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions