Job Description A6X982 Confidence 99.97% Date Sun Jul 8 11:45:03 BST 2012 Rank 3 Aligned Residues 168 % Identity 17% Template d1iuha_ SCOP info LigT-like LigT-like 2'-5' RNA ligase LigT Resolution 2.50

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	A	L	P	I	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K	K	I	T	I	D	L
Query Conservation
Alig confidence									.																.																																												.	.	.	.	.	.
Template Conservation									.																.																																												.	.	.	.	.	.
Template Sequence		L	F	Y	A	V	F	L	.	P	E	E	V	R	A	A	L	V	E	A	Q	T	K	V	.	R	P	F	R	G	W	K	P	V	P	P	H	Q	L	H	L	T	L	L	F	L	G	E	R	P	E	E	E	L	P	D	Y	L	A	L	G	H	R	L	A	R	L	E	.	.	.	.	.	.	A	P	F	R	A	R	L
Template Known Secondary structure									.													G	G	G	.	T	T		T	T						G	G	G													G	G	G															S	.	.	.	.	.	.
Template Predicted Secondary structure									.																.																																												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																		.
Query SS confidence																						.	.	.	.	.	.	.	.																		.
Query Sequence		K	G	T	S	F	F	G	K	S	P	Q	E	A	K	V	L	Y	A	T	P	.	.	.	.	.	.	.	.	V	D	K	H	N	E	W	L	K	V	I	F	T	E	H	N	L	.	F	T	K	D	A	R	P	L	T	L	H	C	T	L	L	N	S	R	Y	I	K	Y	Q	G	R	R	I	R	F	F	N	S	E	P
Query Conservation																						.	.	.	.	.	.	.	.																		.
Alig confidence									.													.	.	.	.	.	.	.	.																		.																																.	.	.
Template Conservation									.																																																																						.	.	.
Template Sequence		R	G	T	G	Y	F	P	.	N	E	G	T	P	R	V	W	F	A	K	A	E	A	E	G	F	L	R	L	A	E	G	L	R	A	G	V	E	E	L	L	G	E	E	A	V	R	I	P	G	W	D	K	P	F	K	P	H	I	T	L	A	R	R	K	A	P	A	P	R	V	P	P	V	L	F	G	L	.	.	.
Template Known Secondary structure								S	.	S	S	S	S		S																											G	G	G	G	G	G	S	T	T	T	T	S												S	S													.	.	.
Template Predicted Secondary structure									.																																																																						.	.	.
Template SS confidence
		75	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	E	K	Y	G	Q	F	L	W	A	H	N	I	E	L	D	K	L	S	I	M	K	T	G	A	V	G	E	P	G	N	M	Y	Y	E	E	L	A	S	I	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	W	P	V	E	G	F	A	L	V	R	.	.	S	E	L	K	P	K	G	P	V	Y	T	V	L	E	K	F	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.					S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
														151	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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