Job Description A6X982 Confidence 2.53% Date Sun Jul 8 11:45:03 BST 2012 Rank 94 Aligned Residues 76 % Identity 13% Template d1h2vz_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.0

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10		.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.				.	.																											.	.
Query SS confidence												.				.	.																											.	.
Query Sequence		M	R	Y	P	N	L	L	F	L	A	.	L	P	I	.	.	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	.	.	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K
Query Conservation												.				.	.																											.	.
Alig confidence												.				.	.													.	.	.	.	.										.	.																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																																									.	.	.	.	.	.
Template Sequence		L	K	K	S	C	T	L	Y	V	G	N	L	S	F	Y	T	T	E	E	Q	I	Y	E	L	F	S	K	S	.	.	.	.	.	G	D	I	K	K	I	I	M	G	L	D	K	M	K	K	T	A	C	G	F	C	F	V	E	Y	Y	S	R	A	D	A	E	N	A	M	R	Y	I	N	G	.	.	.	.	.	.	T
Template Known Secondary structure		T	T	T								S			T	T											G	G	G	.	.	.	.	.	S											T	T	T												S	S											T	T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure																														.	.	.	.	.																																									.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.
		76	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	G	E	K	K	I	T	I	D	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	D	D	R	I	I	R	T	D	W	D
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions