Job Description A6X982 Confidence 4.13% Date Sun Jul 8 11:45:03 BST 2012 Rank 54 Aligned Residues 94 % Identity 16% Template c2vv5D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs Resolution 3.45 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K	K	I	T	I	D	L	K	G	T	S	F	F	G	K	S	P	Q	E	A	K	V	L	Y	A	T	P	.	.	.	.	.	.	V	D	K	H	N
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence													.																																										.	.															.	.	.	.	.	.
Template Conservation													.																																										.	.
Template Sequence		F	S	R	E	P	V	R	R	N	E	F	.	I	I	G	V	A	Y	D	S	D	I	D	Q	V	K	Q	I	L	T	N	I	I	Q	S	E	D	R	I	L	K	D	R	E	M	T	V	R	L	N	E	L	G	.	.	A	S	S	I	N	F	V	V	R	V	W	S	N	S	G	D	L	Q	N	V	Y	W	D	V	L
Template Known Secondary structure		S	S	S	S	S							.						T	T	S																	T	T	B		T	T	S											.	.	S	S	S											T	T	T
Template Predicted Secondary structure													.																																										.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	W	L	K	V	I	F	T	E	H	N	L	.	F	T	K	D	A	R	P	L	T	L	H
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		E	R	I	K	R	E	F	D	A	A	G	I	S	F	P	Y	P	Q	M	D	V	N	F	K
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions