Job Description A6X982 Confidence 4.99% Date Sun Jul 8 11:45:03 BST 2012 Rank 51 Aligned Residues 61 % Identity 16% Template c2rneA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10		.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure									.				.	.
Query SS confidence									.				.	.
Query Sequence		P	N	L	L	F	L	A	.	L	P	I	.	.	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y
Query Conservation									.				.	.
Alig confidence									.				.	.																													.	.	.
Template Conservation																																											.	.	.
Template Sequence		H	F	H	V	F	V	G	D	L	S	P	E	I	T	T	E	D	I	K	A	A	F	A	P	F	G	R	I	S	D	A	R	V	V	K	D	M	A	T	G	K	.	.	.	S	K	G	Y	G	F	V	S	F	F	N	K	W	D	A	E	N	A	I	Q	Q	M	G
Template Known Secondary structure		S							S			T	T											G	G	G												T	T	T		S	.	.	.										S	S												T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions