Job Description A6X982 Confidence 23.69% Date Sun Jul 8 11:45:03 BST 2012 Rank 14 Aligned Residues 70 % Identity 10% Template c2jx2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:negative elongation factor e; PDBTitle: solution conformation of rna-bound nelf-e rrm Resolution UNK

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	Y	P	N	L	L	F	L	A	.	L	P	I	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K
Query Conservation											.
Alig confidence											.																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		R	K	G	N	T	L	Y	V	Y	G	E	D	M	T	P	T	L	L	R	G	A	F	S	P	F	G	N	I	I	D	L	S	M	D	P	P	R	N	.	.	.	.	.	.	.	.	.	C	A	F	V	T	Y	E	K	M	E	S	A	D	Q	A	V	A	E	L	N	G	.	.	.	.	.	.	T	Q	V	E	S	V
Template Known Secondary structure				B								S	S											T	T	T										T	T	T	T	.	.	.	.	.	.	.	.	.							S	S												T	T	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.
		81	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	T	I	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	K	V	N	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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