Job Description A6X982 Confidence 3.97% Date Sun Jul 8 11:45:03 BST 2012 Rank 56 Aligned Residues 77 % Identity 18% Template c2fy1A_ PDB info PDB header:structural protein/rna Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family PDBTitle: a dual mode of rna recognition by the rbmy protein Resolution UNK

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	Y	P	N	L	L	F	L	A	.	L	P	I	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K
Query Conservation											.
Alig confidence											.								.	.																																																		.	.	.	.	.	.
Template Conservation																			.	.																																																		.	.	.	.	.	.
Template Sequence		D	H	P	G	K	L	F	I	G	G	L	N	R	E	T	N	E	.	.	K	M	L	K	A	V	F	G	K	H	G	P	I	S	E	V	L	L	I	K	D	R	T	S	K	S	R	G	F	A	F	I	T	F	E	N	P	A	D	A	K	N	A	A	K	D	M	N	G	.	.	.	.	.	.	K	S	L	H	G	K
Template Known Secondary structure			S										T	T	T				.	.									T	S	S			S							S	T	T	T	T										S	S												S	S	.	.	.	.	.	.		B		S	S	S
Template Predicted Secondary structure																			.	.																																																		.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.
		81	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	T	I	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	V	E	Q
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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