Job Description A6X982 Confidence 39.23% Date Sun Jul 8 11:45:03 BST 2012 Rank 10 Aligned Residues 73 % Identity 8% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10		.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.				.	.
Query SS confidence									.				.	.
Query Sequence		P	N	L	L	F	L	A	.	L	P	I	.	.	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K
Query Conservation									.				.	.
Alig confidence									.				.	.													.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																											.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	.	.	.	.	.	G	H	V	L	Y	A	D	I	K	M	E	N	G	K	S	K	G	C	G	V	V	K	F	E	S	P	E	V	A	E	R	A	C	R	M	M	N	G	.	.	.	.	.	.	M	K	L	S	G	R
Template Known Secondary structure									S			T	T												T	T	.	.	.	.	.	S											T	T				S							S	S											T	T	T	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																											.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.						.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.							600	.	.	.	.	.
		81	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	T	I	D	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	D	V	R	I	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		606	.	.	.	610	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions