Job Description A6X982 Confidence 99.91% Date Sun Jul 8 11:45:03 BST 2012 Rank 4 Aligned Residues 165 % Identity 15% Template c2d4gA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bsu11850; PDBTitle: structure of yjcg protein, a putative 2'-5' rna ligase from2 bacillus subtilis Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	A	L	P	I	S	E	H	Y	I	E	E	S	L	K	Y	F	K	L	T	S	N	D	P	M	I	L	S	G	F	R	G	P	R	V	S	H	L	T	I	G	M	I	P	V	K	N	D	E	D	V	L	K	C	M	D	F	L	Y	N	K	E	D	E	I	R	K	S	Y	G	E	K	K	I	T	I	D	L
Query Conservation
Alig confidence							.																			.	.	.									.	.	.																														.	.	.	.	.	.
Template Conservation							.																			.	.	.									.	.	.																														.	.	.	.	.	.
Template Sequence		Y	G	I	V	L	.	F	P	S	K	K	L	Q	D	L	A	N	S	Y	R	K	R	Y	D	.	.	.	P	S	Y	S	L	I	P	P	.	.	.	H	L	T	L	R	A	S	F	E	C	A	E	E	K	A	D	Q	L	V	S	H	L	R	N	I	A	K	E	S	.	.	.	.	.	.	H	P	L	V	L	K	X
Template Known Secondary structure						B	.																			.	.	.	G	G	G	G	T	S		S	.	.	.		B			S	S						G	G	G														T		.	.	.	.	.	.
Template Predicted Secondary structure							.																			.	.	.									.	.	.																														.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	S	F	F	G	K	S	P	Q	E	A	K	V	L	Y	A	T	P	V	D	K	H	N	E	W	L	K	V	I	F	T	E	H	N	L	F	T	K	D	A	R	P	L	T	L	H	C	T	L	L	N	S	R	Y	I	K	Y	Q	G	R	R	I	R	F	F	N	S	E	P	F	M	E	K	Y	G	Q	F	L
Query Conservation
Alig confidence									.																														.																.	.	.	.	.	.	.	.	.
Template Conservation									.																														.																.	.	.	.	.	.	.	.	.
Template Sequence		T	K	Y	S	S	F	A	.	P	V	N	N	V	I	Y	I	K	A	E	P	T	E	E	L	K	T	L	N	E	K	L	Y	T	G	V	L	A	.	G	E	Q	E	Y	N	F	V	P	H	V	T	V	G	Q	.	.	.	.	.	.	.	.	.	N	L	S	D	D	E	H	S	D	V	L	G	Q	L	K	X	Q	E
Template Known Secondary structure								T	.	T	T																					T	T	S	G	G	G		.	S				S											.	.	.	.	.	.	.	.	.	S														T	T	S
Template Predicted Secondary structure									.																														.																.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	H	N	I	E	L	D	K	L	S	I	M	K	T	G	A	V	G	E	P	G	N	M	Y	Y	E	E	L	A	S	I	P	L
Query Conservation
Alig confidence																			.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		V	S	H	E	E	I	V	D	R	F	H	L	L	Y	Q	L	E	.	.	.	.	.	N	G	S	W	T	V	Y	E	T	F	L	L
Template Known Secondary structure																		T	.	.	.	.	.	T	S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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