Email l.a.kelley@imperial.ac.uk Description C6Y4D3 Date Sun Jul 8 11:45:11 BST 2012 Unique Job ID 76c9a5713729c915

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2d8va1 59.2 40 Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain 2 d1lv3a_ 58.0 43 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG 3 d1ibia2 46.8 47 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 4 c3q8dB_ 45.1 23 PDB header:dna binding protein Chain: B: PDB Molecule:dna repair protein reco; PDBTitle: e. coli reco complex with ssb c-terminus 5 c1u5kA_ 33.4 18 PDB header:recombination,replication Chain: A: PDB Molecule:hypothetical protein; PDBTitle: recombinational repair protein reco 6 d1u5ka2 26.2 18 Fold:ArfGap/RecO-like zinc finger Superfamily:ArfGap/RecO-like zinc finger Family:RecO C-terminal domain-like 7 c3o37D_ 22.9 38 PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide 8 c1brvA_ 21.7 50 PDB header:glycoprotein Chain: A: PDB Molecule:protein g; PDBTitle: solution nmr structure of the immunodominant region of2 protein g of bovine respiratory syncytial virus, 483 structures 9 d2jw6a1 21.3 38 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 10 c2danA_ 21.0 29 PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger mynd domain containing protein 10; PDBTitle: the solution structure of the mynd domain (leu384-cys430)2 of human zinc finger mynd domain containing protein 10 11 c2yqqA_ 20.5 30 PDB header:protein binding Chain: A: PDB Molecule:zinc finger hit domain-containing protein 3; PDBTitle: solution structure of the zf-hit domain in zinc finger hit2 domain-containing protein 3 (trip-3) 12 c2oddA_ 18.2 45 PDB header:metal binding protein Chain: A: PDB Molecule:protein cbfa2t1; PDBTitle: solution structure of the mynd domain from aml1-eto2 complexed with smrt, a corepressor 13 c2jw6A_ 18.2 38 PDB header:transcription Chain: A: PDB Molecule:deformed epidermal autoregulatory factor 1 homolog; PDBTitle: solution structure of the deaf1 mynd domain 14 c2dj8A_ 16.6 50 PDB header:metal binding protein Chain: A: PDB Molecule:protein cbfa2t1; PDBTitle: solution structure of zf-mynd domain of protein cbfa2ti2 (protein mtg8) 15 d2dana1 16.0 40 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 16 c3lqiA_ 14.3 17 PDB header:transferase Chain: A: PDB Molecule:mll1 phd3-bromo; PDBTitle: crystal structure of mll1 phd3-bromo complexed with h3(1-9)k4me22 peptide 17 c3qtlD_ 13.6 50 PDB header:hydrolase/hydrolase inhibitor Chain: D: PDB Molecule:kazal-type serine protease inhibitor spi-1; PDBTitle: structural basis for dual-inhibition mechanism of a non-classical2 kazal-type serine protease inhibitor from horseshoe crab in complex3 with subtilisin 18 c2iybG_ 13.1 45 PDB header:metal-binding Chain: G: PDB Molecule:testin; PDBTitle: structure of complex between the 3rd lim domain of tes and2 the evh1 domain of mena 19 d2dj8a1 11.6 45 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 20 d2d8qa1 11.6 40 Fold:HIT/MYND zinc finger-like Superfamily:HIT/MYND zinc finger-like Family:MYND zinc finger 21 d1hcqa_ not modelled 11.4 29 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 22 c2jxdA_ not modelled 10.8 56 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:serine protease inhibitor kazal-type 2; PDBTitle: nmr structure of human serine protease inhibitor kazal type2 ii (spink2) 23 c2kcxA_ not modelled 10.4 56 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:follistatin-related protein 3; PDBTitle: solution nmr structure of kazal-1 domain of human2 follistatin-related protein 3 (fstl-3). northeast3 structural genomics target hr6186a. 24 d2jz6a1 not modelled 10.2 42 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28 25 d1pcea_ not modelled 9.8 63 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 26 c1y1cA_ not modelled 9.5 56 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:elastase inhibitor; PDBTitle: solution structure of anemonia elastase inhibitor analogue 27 d2cona1 not modelled 9.5 46 Fold:Rubredoxin-like Superfamily:NOB1 zinc finger-like Family:NOB1 zinc finger-like 28 d1lr7a2 not modelled 9.2 63 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 29 d2nlla_ not modelled 8.6 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 30 c1sgdI_ not modelled 8.5 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: asp 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b at ph 6.5 31 c2sgdI_ not modelled 8.5 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: asp 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b at ph 10.7 32 c3u5pF_ not modelled 8.3 38 PDB header:transcription Chain: F: PDB Molecule:e3 ubiquitin-protein ligase trim33; PDBTitle: crystal structure of the complex of trim33 phd-bromo and h3(1-28)2 k9me3k14ack18ack23ac histone peptide 33 c2gb5B_ not modelled 8.2 23 PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution 34 c2jl81_ not modelled 7.9 17 PDB header:ribosome Chain: 1: PDB Molecule:50s ribosomal protein l28; PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit. 35 c3bboY_ not modelled 7.9 17 PDB header:ribosome Chain: Y: PDB Molecule:ribosomal protein l28; PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome 36 c2ybfB_ not modelled 7.8 56 PDB header:ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18; PDBTitle: complex of rad18 (rad6 binding domain) with rad6b 37 c2k0aA_ not modelled 7.8 22 PDB header:metal binding protein Chain: A: PDB Molecule:pre-mrna-splicing factor rds3; PDBTitle: 1h, 15n and 13c chemical shift assignments for rds3 protein 38 c2nu2I_ not modelled 7.8 31 PDB header:hydrolase Chain: I: PDB Molecule:ovomucoid; PDBTitle: accommodation of positively-charged residues in a2 hydrophobic specificity pocket: crystal structures of sgpb3 in complex with omtky3 variants lys18i and arg18i 39 c2wg7B_ not modelled 7.7 33 PDB header:hydrolase Chain: B: PDB Molecule:putative phospholipase a2; PDBTitle: structure of oryza sativa (rice) pla2 40 d2qamz1 not modelled 7.7 33 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28 41 c1sgpI_ not modelled 7.6 31 PDB header:complex (serine protease/inhibitor) Chain: I: PDB Molecule:turkey ovomucoid inhibitor; PDBTitle: ala 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b 42 d1kmaa_ not modelled 7.5 56 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 43 c1zr9A_ not modelled 7.4 29 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 593; PDBTitle: solution structure of a human c2h2-type zinc finger protein 44 d1zr9a1 not modelled 7.4 29 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger 45 d2yt9a2 not modelled 7.4 40 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 46 d1dx5i3 not modelled 7.2 57 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 47 c2jmiA_ not modelled 7.2 17 PDB header:protein binding Chain: A: PDB Molecule:protein yng1; PDBTitle: nmr solution structure of phd finger fragment of yeast yng12 protein in free state 48 c1m8cA_ not modelled 7.2 25 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:ovomucoid; PDBTitle: solution structure of the t state of turkey ovomucoid at ph2 2.5 49 d2hepa1 not modelled 7.2 40 Fold:Long alpha-hairpin Superfamily:YnzC-like Family:YznC-like 50 c2hepA_ not modelled 7.2 40 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: solution nmr structure of the upf0291 protein ynzc from2 bacillus subtilis. northeast structural genomics target3 sr384. 51 d2erwa1 not modelled 7.1 50 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 52 c1sgnI_ not modelled 7.1 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: asn 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b 53 c1imlA_ not modelled 6.9 33 PDB header:metal-binding protein Chain: A: PDB Molecule:cysteine rich intestinal protein; PDBTitle: cysteine rich intestinal protein, nmr, 48 structures 54 d1hraa_ not modelled 6.9 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 55 d1p91a_ not modelled 6.9 27 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase RlmA 56 d1b8ta4 not modelled 6.9 50 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 57 c3n71A_ not modelled 6.7 24 PDB header:transcription Chain: A: PDB Molecule:histone lysine methyltransferase smyd1; PDBTitle: crystal structure of cardiac specific histone methyltransferase smyd1 58 c2sgeI_ not modelled 6.6 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: glu 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b at ph 10.7 59 c1sgeI_ not modelled 6.6 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: glu 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b at ph 6.5 60 c1tbqS_ not modelled 6.4 44 PDB header:complex (serine protease/inhibitor) Chain: S: PDB Molecule:rhodniin; PDBTitle: crystal structure of insect derived double domain kazal2 inhibitor rhodniin in complex with thrombin 61 d1jjda_ not modelled 6.4 50 Fold:Metallothionein Superfamily:Metallothionein Family:Metallothionein 62 d2dara1 not modelled 6.3 57 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 63 d1dsza_ not modelled 6.2 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 64 d1y0pa1 not modelled 6.2 42 Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Di-heme elbow motif 65 c2a66A_ not modelled 6.0 43 PDB header:transcription/dna Chain: A: PDB Molecule:orphan nuclear receptor nr5a2; PDBTitle: human liver receptor homologue dna-binding domain (hlrh-12 dbd) in complex with dsdna from the hcyp7a1 promoter 66 c2kyuA_ not modelled 6.0 32 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase mll; PDBTitle: the solution structure of the phd3 finger of mll 67 d1cita_ not modelled 6.0 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 68 c3sgqI_ not modelled 5.9 31 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: gln 18 variant of turkey ovomucoid inhibitor third domain2 complexed with streptomyces griseus proteinase b at ph 10.7 69 d1xx6a2 not modelled 5.9 44 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Type II thymidine kinase zinc finger 70 d1tbrr1 not modelled 5.8 56 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 71 d2hana1 not modelled 5.8 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 72 d2b3aa1 not modelled 5.8 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 73 c3cbbA_ not modelled 5.7 38 PDB header:transcription/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 4-alpha, dna binding PDBTitle: crystal structure of hepatocyte nuclear factor 4alpha in2 complex with dna: diabetes gene product 74 d1lo1a_ not modelled 5.6 43 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 75 c2gktI_ not modelled 5.4 31 PDB header:hydrolase inhibitor Chain: I: PDB Molecule:ovomucoid; PDBTitle: crystal structure of the p14'-ala32 variant of the n-2 terminally truncated omtky3-del(1-5) 76 c2gkvB_ not modelled 5.4 31 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:ovomucoid; PDBTitle: crystal structure of the sgpb:p14'-ala32 omtky3-del(1-5)2 complex 77 c2gkvA_ not modelled 5.4 31 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:ovomucoid; PDBTitle: crystal structure of the sgpb:p14'-ala32 omtky3-del(1-5)2 complex 78 d1r4ra_ not modelled 5.4 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 79 d2pnxa1 not modelled 5.4 18 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 80 d1nuba3 not modelled 5.3 40 Fold:Kazal-type serine protease inhibitors Superfamily:Kazal-type serine protease inhibitors Family:Ovomucoid domain III-like 81 d1glua_ not modelled 5.3 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor 82 d1we9a_ not modelled 5.3 17 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 83 c2nu4I_ not modelled 5.2 31 PDB header:hydrolase Chain: I: PDB Molecule:ovomucoid; PDBTitle: accommodation of positively-charged residues in a2 hydrophobic specificity pocket: crystal structures of sgpb3 in complex with omtky3 variants lys18i and arg18i 84 c2nu3I_ not modelled 5.2 31 PDB header:hydrolase Chain: I: PDB Molecule:ovomucoid; PDBTitle: accommodation of positively-charged residues in a2 hydrophobic specificity pocket: crystal structures of sgpb3 in complex with omtky3 variants lys18i and arg18i 85 c1hjaI_ not modelled 5.2 31 PDB header:complex (hydrolase/inhibitor) Chain: I: PDB Molecule:ovomucoid inhibitor; PDBTitle: lys 18 variant of turkey ovomucoid inhibitor third domain2 complexed with alpha-chymotrypsin 86 d1r0na_ not modelled 5.1 38 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor