Job Description C6Y4D0 Confidence 99.40% Date Sun Jul 8 11:45:10 BST 2012 Rank 28 Aligned Residues 77 % Identity 16% Template c3b0dB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:centromere protein t; PDBTitle: crystal structure of the chicken cenp-t histone fold/cenp-w complex,2 crystal form ii Resolution 2.20 Å

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Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		V	L	P	L	S	R	V	K	R	I	I	K	Q	D	E	D	V	H	Y	C	S	N	A	S	A	L	L	I	S	V	A	T	E	L	F	V	E	K	L	A	T	E	A	Y	Q	L	A	K	L	Q	K	R	K	G	I	R	Y	R	D	V	E	D	V	V	R	.	.	.	.	.	.	.	K	D	D	Q	F	E	F	L
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																.																																																			.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		E	I	A	S	S	L	I	K	Q	I	F	S	H	Y	.	V	K	T	P	V	T	R	D	A	Y	K	I	V	E	K	C	S	E	R	Y	F	K	Q	I	S	S	D	L	E	A	Y	S	Q	H	A	G	R	K	T	V	E	M	A	D	V	E	L	L	M	R	R	Q	G	L	V	T	D	K	M	P	L	H	V	L	V
Template Known Secondary structure																.			S																																T	T		S														T	T	S	S		S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
		82	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	H	L	P
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		614	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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