Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4A3
Confidence8.24%DateSun Jul 8 11:45:04 BST 2012
Rank18Aligned Residues11
% Identity64%Templatec1q0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.....
Predicted Secondary structure 
Query SS confidence 










Query Sequence  EEEEFILKYIE
Query Conservation 


 

  


Alig confidence 










Template Conservation 










Template Sequence  DEEELIRKAIE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 










   258.260........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions