Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4C1
Confidence5.76%DateSun Jul 8 11:45:08 BST 2012
Rank21Aligned Residues43
% Identity0%Templatec1envA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   17..20.........30.........40.........50.........
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Query Sequence  VYMVYFVHNNQIIEREKMSAGVQKDDERKRIKKERFEDLKRQQ
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Template Sequence  LAVERYLKWMEWDREINNYTSLIHSLIEESQNQQEKNEQELLE
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   70.........80.........90.........100.........110..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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