Return to main results Retrieve Phyre Job Id

Job DescriptionA6X993
Confidence1.14%DateSun Jul 8 11:45:03 BST 2012
Rank81Aligned Residues36
% Identity28%Templatec3p9aI_
PDB info PDB header:dna binding proteinChain: I: PDB Molecule:dna-packaging protein gp3; PDBTitle: an atomic view of the nonameric small terminase subunit of2 bacteriophage p22
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130........
Predicted Secondary structure 

Query SS confidence 



































Query Sequence  LRNDFQIFCTSILFTCYIQSFSLLISNFFIAIEVSR
Query Conservation 



































Alig confidence 



































Template Conservation   
  

 

  

 

  








 







Template Sequence  LREDLSEVVTRAEQVIYDQKFSGAAADLLNANIIAR
Template Known Secondary structure 
TTTTTSS
Template Predicted Secondary structure 



Template SS confidence 



































   88.90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions