Return to main results Retrieve Phyre Job Id

Job DescriptionO43125
Confidence99.66%DateSun Jul 8 11:49:26 BST 2012
Rank106Aligned Residues59
% Identity27%Templated2v1ra1
SCOP infoSH3-like barrel SH3-domain SH3-domain
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150....... ..160.........170.... .....180.. .......190.......
Predicted Secondary structure 












.









.....

.


Query SS confidence 


















.
















. . . . .







.














Query Sequence  HKNVERVLAMYDFPGPDAG. DLGFHAGEVIIVLEHVN. . . . . NDWWRGEL. NGKEGIFPSNYVRLL
Query Conservation          
 
        .

    

 
 
     .....  

 
  . 
  
  
  

   
Alig confidence 


















.
















.....







.














Template Conservation 
       




     
 


   

 
 

           

 
    
  
  
 



 
Template Sequence  PSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII
Template Known Secondary structure  GGG
SS
B

SSTTTB

B
TT

TTS

TTS
GGG
Template Predicted Secondary structure 

































Template SS confidence 

































































   11........20.........30.........40.........50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions