Job Description O43125 Confidence 98.76% Date Sun Jul 8 11:49:26 BST 2012 Rank 212 Aligned Residues 81 % Identity 17% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																															.	.	.	.	.																										.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																										.	.	.	.	.
Query Sequence		Q	S	E	A	S	S	V	N	S	S	T	E	K	L	P	P	P	P	S	Y	P	G	P	N	T	A	H	K	N	V	E	R	V	L	A	M	Y	D	F	P	G	P	D	A	G	.	.	.	.	.	D	L	G	F	H	A	G	E	V	I	I	V	L	E	H	V	N	N	D	W	W	R	G	E	L	.	.	.	.	.
Query Conservation																																															.	.	.	.	.																										.	.	.	.	.
Alig confidence																																															.	.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		E	A	K	I	H	D	L	R	E	Q	L	M	N	S	S	L	G	S	G	T	A	S	L	R	S	N	P	K	R	G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S
Template Known Secondary structure		T	T	T	B							S					S			T	T	T	T					S	S	S	S	S					S	S		B						S				S	S	B			B		T	T										S	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
			183	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	G	K	E	G	I	F	P	S	N	Y
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions