Return to main results Retrieve Phyre Job Id

Job DescriptionO43125
Confidence99.70%DateSun Jul 8 11:49:26 BST 2012
Rank61Aligned Residues66
% Identity35%Templatec2l0aA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:signal transducing adapter molecule 1; PDBTitle: solution nmr structure of signal transducing adapter molecule 1 stam-12 from homo sapiens, northeast structural genomics consortium target3 hr4479e
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure 



































Query SS confidence 

































































Query Sequence  PSYPGPNTAHKNVERVLAMYDFPGPDAGDLGFHAGEVIIVLEHVNNDWWRGELNGKEGIFPSNYVR
Query Conservation 
                
 
        

    

 
 
       

 
   
  
  
  

 
Alig confidence 

































































Template Conservation                   

 

 
    



  

 
 
       
  
   
  
 

  

 
Template Sequence  HHHHSHMNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVT
Template Known Secondary structure 







S



SS
B

SSTTB

B
TT
TT
SS

TT

Template Predicted Secondary structure 































Template SS confidence 

































































   5....10.........20.........30.........40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions