Return to main results Retrieve Phyre Job Id

Job DescriptionO43125
Confidence99.65%DateSun Jul 8 11:49:26 BST 2012
Rank123Aligned Residues67
% Identity25%Templatec2ct4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: solution strutcure of the sh3 domain of the cdc42-2 interacting protein 4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170...... ...180.. .......190.........200...
Predicted Secondary structure 


























..








Query SS confidence 







































.





.




















Query Sequence  TAHKNVERVLAMYDFPGPDAGDLGFHAGEVIIVLEHVNND. WWRGEL. NGKEGIFPSNYVRLLEDSAVK
Query Conservation            
 
        

    

 
 
       .

 
  . 
  
  
  

         
Alig confidence 







































.





.




















Template Conservation 
         


 
 
    


   

 
 
        
       
  
 

  

       

Template Sequence  SSGSSGGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSGPSSG
Template Known Secondary structure 



SS
SS
B


STT


B
TT


SSS

SSS
GGG



S

Template Predicted Secondary structure 




































Template SS confidence 




































































   2.......10.........20.........30.........40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions