Job Description O43125 Confidence 99.89% Date Sun Jul 8 11:49:26 BST 2012 Rank 2 Aligned Residues 153 % Identity 16% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	S	P	V	T	A	P	A	A	Q	P	V	E	S	S	V	P	L	P	L	P	K	R	K	S	S	V	E	K	R	A	G	S	V	A	S	A	V	A	A	M	S	L	S	Q	N	S	G	E	K	R	T	P	E	E	P	R	K	L	P	G	V	P	A	P	Q	K	Q	S	E	A	S	S	V	N	S	S	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G
Template Known Secondary structure		S																																										S	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180											.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	P	P	P	S	Y	P	G	P	N	T	A	H	K	N	V	E	R	V	L	A	M	Y	D	F	P	G	P	D	A	G	D	L	G	F	H	A	G	E	V	I	I	V	L	.	.	.	.	.	E	H	V	N	N	D	W	W	R	G	.	.	.	.	.	.	.	.	.	.	E	L	N	G	K	E	G	I	F
Query Conservation																																																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F
Template Known Secondary structure												S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	N	Y	V	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	N	F	T	E	R	V
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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