 |
| Job Description | C6Y4B9 | | Confidence | 1.39% | Date | Sun Jul 8 11:45:08 BST 2012 |
| Rank | 84 | Aligned Residues | 32 |
| % Identity | 28% | Template | c3rl0j_ |
| PDB info |
PDB header:membrane protein/exocytosis | Chain: J: PDB Molecule:syntaxin-1a; |
PDBTitle: truncated snare complex with complexin (p1)
|
| Resolution | 3.80 Å |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | E | K | V | Q | E | F | L | K | D | S | T | K | E | Q | K | V | F | F | E | S | L | N | N | Q | T | E | R | V | C | Q | Q |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |
| Template Sequence |   |
X | E | E | A | Q | E | A | L | R | Q | A | E | E | E | R | K | A | K | Y | A | K | X | E | A | E | R | E | A | V | R | Q | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|