Return to main results Retrieve Phyre Job Id

Job DescriptionP40996
Confidence95.46%DateSun Jul 8 11:55:18 BST 2012
Rank254Aligned Residues61
% Identity33%Templated2cu1a1
SCOP infobeta-Grasp (ubiquitin-like) CAD & PB1 domains PB1 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.........470.........480.........490.........500.........510.........520..
Predicted Secondary structure 


















Query SS confidence 






























































Query Sequence  CKVKVRLGDETFALRVPSDISFEDFCERLTNKLGECEHLSYRDTNANKVLPLNNVDDLRKACS
Query Conservation   


    

  
 
  
      
      

                  
  



   
 
Alig confidence 









































..


















Template Conservation 






 




    


  
 

 
    

  

  
 ..
 

 


  
 






Template Sequence  VRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFGQSMDLHYT. . NNELVIPLTTQDDLDKAVE
Template Known Secondary structure  TT
SS

SS

..SSSS


S
Template Predicted Secondary structure 










..




Template SS confidence 






























































   910.........20.........30.........40.........50 .........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions