Return to main results Retrieve Phyre Job Id

Job DescriptionP40996
Confidence98.98%DateSun Jul 8 11:55:18 BST 2012
Rank231Aligned Residues53
% Identity32%Templatec3uatA_
PDB info PDB header:peptide binding proteinChain: A: PDB Molecule:disks large homolog 1; PDBTitle: guanylate kinase domains of the maguk family scaffold proteins as2 specific phospho-protein binding modules
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40. ........50.........60........ .70.........80.
Predicted Secondary structure 








.....












....





Query SS confidence 













. . . . .


























. . . .












Query Sequence  VIRALYDYTARKAT. . . . . EVSFAKGDFFHVIGRENDKAWYEVCNP. . . . AAGTRGFVPVSHF
Query Conservation 







 
    .....



 


 
 

    
  
  
 
 ....  
  
 

 


Alig confidence 













.....












.












....












Template Conservation 



 


    
   
   
 
  



 
 .      

 
  
         
 


   
Template Sequence  YVRALFDYDKTKDSGLPSQGLNFKFGDILHVI. NASDDEWWQARQVTPDGESDEVGVIPSKRR
Template Known Secondary structure 
S


TTT



SS
B



TT
.

SSS
SS
B
S


Template Predicted Secondary structure 




















.













Template SS confidence 






























































   584.....590.........600.........610..... ....620.........630.........640.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions