Job Description P40996 Confidence 99.07% Date Sun Jul 8 11:55:18 BST 2012 Rank 225 Aligned Residues 101 % Identity 18% Template c3p0cA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:nischarin; PDBTitle: nischarin px-domain Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		V	A	A	M	V	E	N	Y	M	I	R	D	D	Q	Y	W	Y	L	V	R	A	V	M	S	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y	M	P	G	P	V	D	D	V	N	.	.	E	L	I	S	S
Query Conservation																																																																											.	.
Alig confidence																								.																											.	.	.	.	.	.	.	.	.																.	.
Template Conservation																								.																											.	.	.	.	.	.	.	.	.
Template Sequence		M	E	A	R	V	V	G	S	E	L	V	D	T	Y	T	V	Y	I	I	Q	V	T	.	D	G	S	H	E	W	T	V	K	H	R	Y	S	D	F	H	D	L	H	E	K	L	V	A	E	R	.	.	.	.	.	.	.	.	.	K	I	D	K	N	L	L	P	P	K	K	I	I	G	K	N	S	R	S	L	V	E
Template Known Secondary structure												S	S	S	S									.		S	S																						T	T	.	.	.	.	.	.	.	.	.	S	S		T	T	S								S				S		S
Template Predicted Secondary structure																								.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.										.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L	P	L	D
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		K	R	E	K	D	L	E	V	Y	L	Q	K	L	L	A	A	F	P	.	G	V	T	P	R	V	L	A	H	F	L	H	F	H	F
Template Known Secondary structure																	T	S		.	S												S		T
Template Predicted Secondary structure																				.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions