Job Description P40996 Confidence 69.44% Date Sun Jul 8 11:55:18 BST 2012 Rank 290 Aligned Residues 105 % Identity 18% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	K	G	D	F	F	H	V	I	G	R	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	R	G	F	V	P	V	S	H	F	E	E	I	G	K	T	V	K	S	E	R	D	S	D	G	S	G	Q	I	S	F	T	D	L	T	T	N	S	S	T	T	R	S	S	I	S	E	L	H	S	G	S
Query Conservation
Alig confidence																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	.	.	E	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E
Template Known Secondary structure					T	T										T	T	S	S					.	.			S	S							G	G	G												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																															.	.
		124	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		Q	P	L	F	G	I	V	Q	F	D	F	.	.	.	.	A	A	E	R	P	D	E	L	E	A	K	A	G	E	A	I	I	I	I	A	R	S	N	H	E	W	L	V	A	K	P	I	G	R	L	G	G	P	G	L	I	P	L	S	F	I
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		S	G	S	L	A	A	I	L	R	D	D	T	S	L	N	G	A	D	G	T	H	L	A	T	A	H	I	G	T	V	L	P	L	S	G	A	S	Q	V	G	R	T	V	L	V	P	V	R	A	P	E	G	H	A	V	V	V	P	V	L	L
Template Known Secondary structure		S	S							S	T	T						T	T	S								T	T										S	S											T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions