Job Description P40996 Confidence 99.12% Date Sun Jul 8 11:55:18 BST 2012 Rank 223 Aligned Residues 103 % Identity 23% Template c3iq2B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-7; PDBTitle: human sorting nexin 7, phox homology (px) domain Resolution 1.70 Å

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		299	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.		.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																.	.	.			.									.	.	.	.
Query SS confidence																.	.	.			.									.	.	.	.
Query Sequence		V	A	A	M	V	E	N	Y	M	I	R	D	D	Q	.	.	.	Y	W	.	Y	L	V	R	A	V	M	S	.	.	.	.	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y	M	P	G	P	V	D	D	V
Query Conservation																.	.	.			.									.	.	.	.
Alig confidence																.	.	.			.									.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		L	F	I	T	V	D	E	P	E	S	H	V	T	T	I	E	T	F	I	T	Y	R	I	I	T	K	T	S	R	G	E	F	D	S	S	E	F	E	V	R	R	R	Y	Q	D	F	L	W	L	K	G	K	L	E	E	A	H	P	.	.	.	.	.	.	.	.	T	L	I	I	P	P	L	P	E	K	F	M	V	E
Template Known Secondary structure															S	S												S		S	S	S	S	S																									T	.	.	.	.	.	.	.	.	T	S												G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.
		371			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	E	L	I	S	S	Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L	P	L	D
Query Conservation			.	.
Alig confidence			.	.																								.
Template Conservation																												.
Template Sequence		R	F	N	D	D	F	I	E	T	R	R	K	A	L	H	K	F	L	N	R	I	A	D	H	P	T	.	L	T	F	N	E	D	F	K	I	F	L	T	A	Q	A
Template Known Secondary structure		G	G																					T	S	T	T	.	G	G	G										T	T
Template Predicted Secondary structure																												.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions