Job Description P40996 Confidence 99.13% Date Sun Jul 8 11:55:18 BST 2012 Rank 222 Aligned Residues 111 % Identity 16% Template c3hpbA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:snx5 protein; PDBTitle: crystal structure of snx5-px domain in p212121 space group Resolution 2.19 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																									.	.
Query SS confidence																															.	.	.	.																									.	.
Query Sequence		S	E	P	T	V	V	A	A	M	V	E	N	Y	M	I	R	D	D	Q	Y	W	Y	L	V	R	A	V	M	S	.	.	.	.	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	.	.	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y	M	P	G	P	V
Query Conservation																															.	.	.	.																									.	.
Alig confidence																															.	.	.	.																									.	.		.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		N	V	D	P	S	L	Q	I	D	I	P	D	A	L	S	E	R	D	K	V	K	F	T	V	H	T	K	T	T	L	P	T	F	Q	S	P	E	F	S	V	T	R	Q	H	E	D	F	V	W	L	H	D	T	L	T	E	T	T	D	Y	.	.	.	.	.	.	.	.	A	G	L	I	I	P	P	A	P	T	K	P
Template Known Secondary structure				S		S												T	T													T	T	S	S		S																				T		G	G	G	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.									.	.	.	.	90	.	.	.	.	.	.	.
		368	.	370																																.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	L	I	S	S	Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L	P	L	D	G	D	V	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.													.
Template Conservation																																																												.													.
Template Sequence		D	F	D	G	P	R	E	K	X	Q	K	L	G	E	G	E	G	S	X	T	K	E	E	F	A	K	X	K	Q	E	L	E	A	E	Y	L	A	V	F	K	K	T	V	S	S	H	E	V	F	L	Q	R	L	S	S	H	P	V	.	L	S	K	D	R	N	F	H	V	F	L	E	.	Y	D	Q	D	L	S
Template Known Secondary structure																T	G	G	G	S																																						T	T	.	G	G	G										.			S		T	T
Template Predicted Secondary structure																																																												.													.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions