Job Description P40996 Confidence 99.03% Date Sun Jul 8 11:55:18 BST 2012 Rank 229 Aligned Residues 93 % Identity 15% Template c3fogA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-17; PDBTitle: crystal structure of the px domain of sorting nexin-172 (snx17) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		A	M	V	E	N	Y	M	I	R	D	D	Q	Y	W	Y	L	V	R	A	V	M	S	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y	M	P	G	P	V	D	D	V	N	E	.	L	I	S	S	Q	R	A
Query Conservation																																																																										.
Alig confidence							.														.	.	.	.																									.	.	.	.	.	.	.	.																		.
Template Conservation							.														.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		F	S	I	P	E	.	T	E	S	R	A	Y	V	A	Y	N	I	H	V	.	.	.	.	N	G	V	L	H	C	R	V	R	Y	S	Q	L	L	G	L	H	E	Q	L	R	K	E	Y	.	.	.	.	.	.	.	.	G	A	N	V	L	P	A	F	P	P	K	K	L	F	S	L	T	P	A	E	V	E	Q	R	R
Template Known Secondary structure							.	B													.	.	.	.	T	T																							.	.	.	.	.	.	.	.		T	T	T	S								S	S
Template Predicted Secondary structure							.														.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		E	Q	L	E	K	Y	M	Q	A	V	R	Q	D	P	L	.	L	G	S	S	E	T	F	N	S	F	L	R
Template Known Secondary structure																	.			T
Template Predicted Secondary structure																	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions