Job Description P40996 Confidence 98.89% Date Sun Jul 8 11:55:18 BST 2012 Rank 235 Aligned Residues 110 % Identity 17% Template c3dyuB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sorting nexin-9; PDBTitle: crystal structure of snx9px-bar (230-595), h32 Resolution 4.10 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		K	N	K	K	D	M	S	S	E	P	T	V	V	A	A	M	V	E	N	Y	M	I	R	.	.	.	.	D	D	Q	Y	W	Y	L	V	R	A	V	M	S	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.															.	.	.																						.	.	.	.	.	.	.
Template Conservation																																											.	.	.																						.	.	.	.	.	.	.
Template Sequence		G	P	M	W	V	Y	P	T	S	T	F	D	C	V	V	A	D	P	R	K	G	S	K	M	Y	G	L	K	S	Y	I	E	Y	Q	L	T	P	T	N	T	N	.	.	.	R	S	V	N	H	R	Y	K	H	F	D	W	L	Y	E	R	L	L	V	K	F	.	.	.	.	.	.	.	G	S	A	I	P	I	P	S
Template Known Secondary structure									S	S															S	S	S	S											S	S	S		.	.	.																						.	.	.	.	.	.	.	T	T	T	S
Template Predicted Secondary structure																																											.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		M	P	G	P	V	D	D	V	N	.	.	E	L	I	S	S	Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L
Query Conservation											.	.
Alig confidence											.	.																								.
Template Conservation																																				.
Template Sequence		L	P	D	K	Q	V	T	G	R	F	E	E	E	F	I	K	M	R	M	E	R	L	Q	A	W	M	T	R	M	C	R	H	P	V	.	I	S	E	S	E	V	F	Q	Q	F	L	N
Template Known Secondary structure							S	S		T	T	S																				T		T	T	.	T	T	T	S								S
Template Predicted Secondary structure																																				.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions