Job Description P40996 Confidence 99.42% Date Sun Jul 8 11:55:18 BST 2012 Rank 198 Aligned Residues 58 % Identity 26% Template c2vknA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2 Resolution 2.05 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	R	A	L	Y	D	Y	T	A	R	K	A	T	.	.	E	V	S	F	A	K	G	D	F	F	H	V	I	G	R	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	R	G	F	V	P	V	S	H	F	E	E	I	G	K	T	V	K
Query Conservation															.	.
Alig confidence															.	.														.	.												.
Template Conservation																														.	.												.
Template Sequence		A	K	A	L	Y	P	Y	D	A	D	D	D	D	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	.	.	D	I	E	G	R	W	W	K	A	R	R	.	A	N	G	E	T	G	I	I	P	S	N	Y	V	Q	L	I	D	G	P	E	E
Template Known Secondary structure					S	S		B				S	S	S	T	T	B			B		T	T							.	.		T	T	S	S							.	T	T	S							G	G	G
Template Predicted Secondary structure																														.	.												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions