Job Description P40996 Confidence 28.59% Date Sun Jul 8 11:55:18 BST 2012 Rank 339 Aligned Residues 76 % Identity 18% Template c2ojrA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin; PDBTitle: structure of ubiquitin solved by sad using the lanthanide-2 binding tag Resolution 2.60 Å

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		454	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.			.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																												.	.																												.
Query SS confidence															.																												.	.																												.
Query Sequence		T	T	A	G	S	T	C	K	V	K	V	R	L	.	G	D	E	T	F	A	L	R	V	P	S	D	I	S	F	E	D	F	C	E	R	L	T	N	K	L	G	.	.	E	C	E	H	L	S	Y	R	D	T	N	A	N	K	V	L	P	L	N	N	V	D	D	L	R	K	A	.	C	S	Q	E	S	G	V	L	L
Query Conservation															.																												.	.																												.
Alig confidence															.																												.	.											.	.	.	.	.													.
Template Conservation																																																							.	.	.	.	.
Template Sequence		G	D	E	L	L	A	M	Q	I	F	V	K	T	L	T	G	K	T	I	T	L	E	V	E	P	S	D	T	I	E	N	V	K	A	K	I	Q	D	K	E	G	I	P	P	D	Q	Q	R	L	I	F	A	G	.	.	.	.	.	K	Q	L	E	D	G	R	T	L	S	D	Y	N	I	Q	K	E	S	T	L	H	L
Template Known Secondary structure		G	G	G	S	S									S	S	S									T	T		B																T	T	T						T	T	.	.	.	.	.					S	S		B	T	T	T	T	T			T	T
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	R	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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