Return to main results Retrieve Phyre Job Id

Job DescriptionP40996
Confidence99.97%DateSun Jul 8 11:55:18 BST 2012
Rank2Aligned Residues153
% Identity20%Templatec2l3sA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:autoinhibited crk protein; PDBTitle: structure of the autoinhibited crk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  KVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSHFEEIGKTVKSERDSDGSGQISFTDLT
Query Conservation 








 
    



 


 
 

    
  
  
 
   
  
 

 



 
                      
Alig confidence 



























.











.





































Template Conservation 
   

 

 
   




  

 
 
 .      

    .  
  
  
                             
Template Sequence  EYVRALFDFNGNDDEDLPFKKGDILKIR. DKPEEQWWNAED. MDGKRGMIPVPYVEKCRPSSASVSTLTGGNQDSSHPQP
Template Known Secondary structure 
S
S




SSSB



SS.
SSSS
.SSS
GGGS

S


SS


SSSS


S





Template Predicted Secondary structure 


















.




.






























Template SS confidence 















































































   136...140.........150.........160... ......170..... ....180.........190.........200.........210...
 
   107..110.........120....... ..130.........140.........150.........160.........170........
Predicted Secondary structure 



















........




























Query SS confidence 




















. . . . . . . .


















































Query Sequence  TNSSTTRSSISELHSGSQPLF. . . . . . . . GIVQFDFAAERPDELEAKAGEAIIIIARSNHEWLVAKPIGRLGGPGLIPLS
Query Conservation                       ........  




 
   



   

 
 
       
       
 
  

 
  
Alig confidence 




















........




































...










Template Conservation                                 
 
   
    


   

 
 

      
  
 ...  
  
  


Template Sequence  LGGPEPGPYAQPSINTPLPNLQNGPFYARVIQKRVPNAYDKTALALEVGELVKVTKINMSGQWEGE. . . CNGKRGHFPFT
Template Known Secondary structure  SS


SS
SS
SS


S

SS
S
SS
B
B
S




TTTTS




TT

B





SSSS
...SSS


GG
Template Predicted Secondary structure 


































...



Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270......... 280.........290
 
   179180....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  FIQLRD
Query Conservation 


   
Alig confidence 





Template Conservation 

    
Template Sequence  HVRLLD
Template Known Secondary structure  GB



Template Predicted Secondary structure 
Template SS confidence 





   291.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions