Job Description P40996 Confidence 99.80% Date Sun Jul 8 11:55:18 BST 2012 Rank 12 Aligned Residues 112 % Identity 41% Template c2kymA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

123

.

.

.

.

.

.

130

.

.

.

.

.

.

.

.

.

140

.

.

.

.

.

.

.

.

.

150

.

.

.

.

.

.

.

.

.

160

.

.

.

.

.

.

.

.

.

170

.

.

.

.

.

.

.

.

.

180

.

.

.

.

.

.

.

.

.

190

.

.

.

.

.

.

.

.

Predicted Secondary structure

.

.

.

.

Query SS confidence

.

.

.

.

Query Sequence

S

Q

P

L

F

G

I

V

Q

F

D

F

A

A

E

R

P

D

E

L

E

A

K

A

G

E

A

I

I

I

I

A

R

S

N

H

E

W

L

V

A

K

P

I

G

R

L

G

G

P

G

L

I

P

L

S

F

I

Q

L

R

D

L

K

T

G

A

V

I

K

D

V

S

E

A

V

.

.

.

.

Query Conservation

.

.

.

.

Alig confidence

.

.

.

.

Template Conservation

Template Sequence

M

A

P

L

F

A

V

T

L

Y

E

F

K

A

E

R

D

D

E

L

D

V

S

P

G

E

N

L

S

I

C

A

H

Y

D

Y

E

W

F

I

A

K

P

I

N

R

L

G

G

P

G

L

V

P

V

S

Y

V

R

I

I

D

L

M

D

P

A

K

Y

A

S

V

D

T

Y

D

R

E

Q

V

Template Known Secondary structure

S

B

S

T

T

B

T

T

T

T

T

S

S

S

S

G

G

G

S

S

T

T

T

S

S

S

S

T

T

S

Template Predicted Secondary structure

Template SS confidence

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions