Job Description P40996 Confidence 24.74% Date Sun Jul 8 11:55:18 BST 2012 Rank 348 Aligned Residues 80 % Identity 20% Template c2dhzA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rap guanine nucleotide exchange factor (gef)- PDBTitle: solution structure of the ra domain in the human link2 guanine nucleotide exchange factor ii (link-gefii) Resolution UNK

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		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.										.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																					.																								.	.	.	.	.	.	.	.	.
Query SS confidence																					.																								.	.	.	.	.	.	.	.	.
Query Sequence		S	A	P	T	T	A	G	S	T	C	K	V	K	V	R	L	G	D	E	.	T	F	A	L	R	V	P	S	D	I	S	F	E	D	F	C	E	R	L	T	N	K	L	.	.	.	.	.	.	.	.	.	G	E	C	E	H	L	S	Y	R	D	T	N	A	N	K	V	L	P	L	N	N	V	D	D	L	R	K	A
Query Conservation																					.																								.	.	.	.	.	.	.	.	.
Alig confidence																					.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	D	E	I	F	C	R	V	Y	M	P	D	H	S	Y	V	T	I	R	S	R	L	S	A	S	V	Q	D	I	L	G	S	V	T	E	K	L	Q	Y	S	E	E	P	A	G	R	E	D	S	L	I	L	V	A	V	S	S	S	G	E	K	V	L	L	Q	P	T	E	D	C	V	F	T	A
Template Known Secondary structure						S	S											T	T	S									T	T														S	T	T		S	S	T	T	S			S									T	T								T	T		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		521	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	Q	E	S	G	V	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	I	N	S	H	L	F	A	C
Template Known Secondary structure		S		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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