Job Description P40996 Confidence 99.24% Date Sun Jul 8 11:55:18 BST 2012 Rank 214 Aligned Residues 127 % Identity 16% Template c2cskA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin 12; PDBTitle: solution structure of px domain from human snx12 Resolution UNK

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.		.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																						.	.	.			.									.	.	.	.
Query SS confidence																						.	.	.			.									.	.	.	.
Query Sequence		S	S	E	P	T	V	V	A	A	M	V	E	N	Y	M	I	R	D	D	Q	.	.	.	Y	W	.	Y	L	V	R	A	V	M	S	.	.	.	.	D	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P	Y	M	P
Query Conservation																						.	.	.			.									.	.	.	.
Alig confidence																						.	.	.			.									.	.	.	.
Template Conservation
Template Sequence		S	S	G	S	N	F	L	E	I	D	I	F	N	P	Q	T	V	G	V	G	R	A	R	F	T	T	Y	E	V	R	M	R	T	N	L	P	I	F	K	L	K	E	S	C	V	R	R	R	Y	S	D	F	E	W	L	K	N	E	L	E	R	D	S	K	I	V	V	P	P	L	P	G	K	A	L	K	R	Q	L	P
Template Known Secondary structure					S														S	S	S	S	S														S	S	S	S		S																			S	S	S	S	S							S							S	S	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		365	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		G	P	V	D	D	V	.	.	N	E	L	I	S	S	Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L	P	L	D	G	D	V	E	S	P	H	P	T	S
Query Conservation								.	.
Alig confidence								.	.																									.
Template Conservation																																		.
Template Sequence		F	R	G	D	E	G	I	F	E	E	S	F	I	E	E	R	R	Q	G	L	E	Q	F	I	N	K	I	A	G	H	P	L	.	A	Q	N	E	R	C	L	H	M	F	L	Q	E	E	A	I	D	R	N	Y	V	P	G	K	S
Template Known Secondary structure		T				S	S																											.											T	T		S	S			S	S					S
Template Predicted Secondary structure																																		.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions