Job Description P40996 Confidence 99.94% Date Sun Jul 8 11:55:18 BST 2012 Rank 7 Aligned Residues 128 % Identity 23% Template c1ov3A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosol factor 1; PDBTitle: structure of the p22phox-p47phox complex Resolution 1.80 Å

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		22	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		I	E	P	P	R	K	V	I	.	.	.	.	R	A	L	Y	D	Y	T	A	R	K	A	T	E	V	S	F	A	K	G	D	F	F	H	V	I	G	R	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	R	G	F	V	P	V	S	H	F	E	E	I	G	K	T	V	K	S	E	R	D	S	D	G	S
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																										.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	S	P	E	F	I	I	L	Q	T	Y	R	A	I	A	D	Y	E	K	T	S	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	.	E	K	S	E	S	G	W	W	F	C	Q	.	.	M	K	A	K	R	G	W	I	P	A	S	F	L	E	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S		B			S	S	T	T	S			B		T	T							.				T	T	S						.	.										G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	I	S	F	T	D	L	T	T	N	S	S	T	T	R	S	S	I	S	E	L	H	S	G	S	Q	P	L	F	G	I	V	Q	F	D	F	A	A	E	R	P	D	E	L	E	A	K	A	G	E	A	I	I	I	I	A	R	S	N	H	E	W	L	V	A	K	P	I	G	R	L	G	G	P	G	L	I	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	P	D	E	T	E	D	P	E	P	N	Y	A	G	E	P	Y	V	A	I	K	A	Y	T	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	L	L	D	G	W	W	V	I	R	K	D	D	V	T	.	.	.	G	Y	F	P	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S			S					T	T							S	S		B				S	T	T	B			B		T	T										T	T	S							T	T			.	.	.					G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template SS confidence
															214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.
		178	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Y	L	Q
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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